Detailed information NTG0199941

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CFI09_RS24365
• Genome accession: NZ_CP022279
• Coordinates: 4650600..4651625 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STEC299
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4645600..4656625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFI09_RS24345 (CFI09_24260)	metJ	4646785..4647102 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
CFI09_RS24350 (CFI09_24265)	yiiX	4647162..4647770 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
CFI09_RS24355 (CFI09_24270)	rpmE	4647831..4648043 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
CFI09_RS24360 (CFI09_24275)	priA	4648246..4650444 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
CFI09_RS24365 (CFI09_24280)	cytR	4650600..4651625 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CFI09_RS24370 (CFI09_24285)	ftsN	4651717..4652676 (+)	960	WP_000068834.1	cell division protein FtsN	-
CFI09_RS24375 (CFI09_24290)	hslV	4652769..4653299 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
CFI09_RS24380 (CFI09_24295)	hslU	4653309..4654640 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
CFI09_RS24385 (CFI09_24300)	menA	4654707..4655633 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CFI09_RS24390 (CFI09_24305)	rraA	4655726..4656211 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CFI09_RS24395 (CFI09_24310)	zapB	4656296..4656541 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=199941 CFI09_RS24365 WP_000644904.1 4650600..4651625(+) (cytR) [Escherichia coli strain STEC299]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=199941 CFI09_RS24365 WP_000644904.1 4650600..4651625(+) (cytR) [Escherichia coli strain STEC299]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628