Detailed information NTG0199678

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CE141_RS23590
• Genome accession: NZ_CP022164
• Coordinates: 4693639..4694664 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain M160133
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4688639..4699664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CE141_RS23580 (CE141_23570)	rpmE	4690870..4691082 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
CE141_RS23585 (CE141_23575)	priA	4691285..4693483 (+)	2199	WP_001330197.1	primosomal protein N'	Machinery gene
CE141_RS23590 (CE141_23580)	cytR	4693639..4694664 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CE141_RS23595 (CE141_23585)	ftsN	4694756..4695715 (+)	960	WP_000068834.1	cell division protein FtsN	-
CE141_RS23600 (CE141_23590)	hslV	4695809..4696339 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
CE141_RS23605 (CE141_23595)	hslU	4696349..4697680 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
CE141_RS23610 (CE141_23600)	menA	4697747..4698673 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CE141_RS23615 (CE141_23605)	rraA	4698766..4699251 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CE141_RS23620 (CE141_23610)	zapB	4699336..4699581 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=199678 CE141_RS23590 WP_000644904.1 4693639..4694664(+) (cytR) [Escherichia coli strain M160133]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=199678 CE141_RS23590 WP_000644904.1 4693639..4694664(+) (cytR) [Escherichia coli strain M160133]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628