Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG565_RS10895 | Genome accession | NZ_CP017508 |
| Coordinates | 2172745..2173083 (-) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 28240 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2167745..2178083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG565_RS10880 (BG565_10640) | - | 2167747..2169216 (-) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
| BG565_RS10885 (BG565_10645) | hsdR | 2169264..2171615 (-) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG565_RS10890 (BG565_10650) | asd | 2171687..2172580 (-) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG565_RS10895 (BG565_10655) | comEA/comE1 | 2172745..2173083 (-) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG565_RS10900 (BG565_10660) | - | 2173376..2174650 (+) | 1275 | WP_142778023.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG565_RS10905 (BG565_10665) | - | 2174710..2175126 (+) | 417 | WP_020824267.1 | MliC family protein | - |
| BG565_RS10910 (BG565_10670) | waaF | 2175237..2176274 (+) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| BG565_RS10915 (BG565_10675) | rfaC | 2176342..2177301 (+) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG565_RS10920 (BG565_10680) | rpsL | 2177422..2177796 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199305 BG565_RS10895 WP_006251644.1 2172745..2173083(-) (comEA/comE1) [Mannheimia haemolytica strain 28240]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199305 BG565_RS10895 WP_006251644.1 2172745..2173083(-) (comEA/comE1) [Mannheimia haemolytica strain 28240]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |