Detailed information NTG0199283

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A6J90_RS07185
• Genome accession: NZ_CP022076
• Coordinates: 1359346..1360299 (+)
• Length: 317 a.a.
• NCBI ID: WP_002839071.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain FDAARGOS_262
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1354346..1365299

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J90_RS07160 (A6J90_07160)	neuC	1354922..1356046 (+)	1125	WP_002882962.1	UDP-N-acetylglucosamine 2-epimerase	-
A6J90_RS07165 (A6J90_07165)	-	1356039..1356581 (+)	543	Protein_1384	beta-1,4-N-acetylgalactosaminyltransferase	-
A6J90_RS09530	-	1356653..1356985 (+)	333	WP_016818192.1	hypothetical protein	-
A6J90_RS07170 (A6J90_07170)	-	1356982..1357647 (+)	666	WP_002869017.1	acylneuraminate cytidylyltransferase family protein	-
A6J90_RS07175 (A6J90_07175)	-	1357635..1358468 (+)	834	WP_002882959.1	CatB-related O-acetyltransferase	-
A6J90_RS07180 (A6J90_07180)	-	1358460..1359287 (-)	828	WP_002869015.1	glycosyltransferase family 2 protein	-
A6J90_RS07185 (A6J90_07185)	waaF	1359346..1360299 (+)	954	WP_002839071.1	glycosyltransferase family 9 protein	Regulator
A6J90_RS07190 (A6J90_07190)	-	1360306..1361061 (-)	756	WP_002869013.1	glycosyltransferase family 25 protein	-
A6J90_RS07195 (A6J90_07195)	gmhA	1361061..1361621 (-)	561	WP_002869012.1	D-sedoheptulose 7-phosphate isomerase	-
A6J90_RS07200 (A6J90_07200)	rfaE1	1361618..1363003 (-)	1386	WP_002882955.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A6J90_RS07205 (A6J90_07205)	rfaD	1362996..1363949 (-)	954	WP_002882954.1	ADP-glyceromanno-heptose 6-epimerase	-
A6J90_RS07210 (A6J90_07210)	gmhB	1363950..1364510 (-)	561	WP_002882953.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A6J90_RS07215 (A6J90_07215)	-	1364592..1364894 (+)	303	WP_002852762.1	cytochrome c	-
A6J90_RS07220 (A6J90_07220)	ccoS	1364917..1365123 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36557.15 Da
• Isoelectric Point: 10.2875

>NTDB_id=199283 A6J90_RS07185 WP_002839071.1 1359346..1360299(+) (waaF) [Campylobacter jejuni strain FDAARGOS_262]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN

Nucleotide

• Length: 954 bp

>NTDB_id=199283 A6J90_RS07185 WP_002839071.1 1359346..1360299(+) (waaF) [Campylobacter jejuni strain FDAARGOS_262]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.631	99.054	0.927