Detailed information NTG0198765

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: CD796_RS00165
• Genome accession: NZ_CP021999
• Coordinates: 37506..38531 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain Pa84
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 32506..43531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CD796_RS00140 (CD796_00140)	-	32694..33011 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
CD796_RS00145 (CD796_00145)	trkA	33160..34533 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
CD796_RS00150 (CD796_00150)	rsmB	34561..35865 (-)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CD796_RS00155 (CD796_00155)	fmt	35862..36806 (-)	945	WP_003107057.1	methionyl-tRNA formyltransferase	-
CD796_RS00160 (CD796_00160)	def	36861..37367 (-)	507	WP_003097293.1	peptide deformylase	-
CD796_RS00165 (CD796_00165)	tsaP	37506..38531 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
CD796_RS00170 (CD796_00170)	dprA	38670..39758 (+)	1089	WP_088406447.1	DNA-processing protein DprA	Machinery gene
CD796_RS00175 (CD796_00175)	-	39799..40356 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
CD796_RS00180 (CD796_00180)	-	40366..41342 (-)	977	Protein_35	NADPH:quinone reductase	-
CD796_RS00185 (CD796_00185)	hemF	41533..42450 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
CD796_RS00190 (CD796_00190)	aroE	42508..43332 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=198765 CD796_RS00165 WP_003097294.1 37506..38531(+) (tsaP) [Pseudomonas aeruginosa strain Pa84]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=198765 CD796_RS00165 WP_003097294.1 37506..38531(+) (tsaP) [Pseudomonas aeruginosa strain Pa84]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAAAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393