Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BIZ42_RS05060 Genome accession   NZ_CP017483
Coordinates   1144668..1145069 (-) Length   133 a.a.
NCBI ID   WP_019185139.1    Uniprot ID   A0AAJ6FXM3
Organism   Stenotrophomonas sp. LM091     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139668..1150069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BIZ42_RS05045 (BIZ42_05045) - 1141677..1143713 (-) 2037 WP_019185136.1 methyl-accepting chemotaxis protein -
  BIZ42_RS05050 (BIZ42_05050) - 1143757..1144287 (-) 531 WP_019185137.1 chemotaxis protein CheW -
  BIZ42_RS05055 (BIZ42_05055) - 1144287..1144649 (-) 363 WP_019185138.1 response regulator -
  BIZ42_RS05060 (BIZ42_05060) pilG 1144668..1145069 (-) 402 WP_019185139.1 twitching motility response regulator PilG Regulator
  BIZ42_RS05065 (BIZ42_05065) gshB 1145329..1146279 (+) 951 WP_019185140.1 glutathione synthase -
  BIZ42_RS05070 (BIZ42_05070) - 1146276..1147163 (+) 888 WP_070425750.1 energy transducer TonB -
  BIZ42_RS05075 (BIZ42_05075) tsaB 1147270..1147980 (-) 711 WP_070425751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  BIZ42_RS05080 (BIZ42_05080) - 1147986..1150043 (-) 2058 WP_070425752.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14707.11 Da        Isoelectric Point: 6.3478

>NTDB_id=198704 BIZ42_RS05060 WP_019185139.1 1144668..1145069(-) (pilG) [Stenotrophomonas sp. LM091]
MTEYMAAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=198704 BIZ42_RS05060 WP_019185139.1 1144668..1145069(-) (pilG) [Stenotrophomonas sp. LM091]
ATGACTGAATACATGGCTGCGGGTGGGGAACTCGCAGGGCTGCGCGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACCGCGGAAACCCTGTTGAAGCGGGAAGGCTGCGAGGTGGTGACCGCGACCGATGGTTTCGAGGCGTTGGCCAAGATCG
CCGACCAACAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGGTATCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAAGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCATTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment