Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CD200_RS09330 | Genome accession | NZ_CP021970 |
| Coordinates | 1804010..1804372 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain CBA7132 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1799010..1809372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD200_RS09300 (CD200_09325) | flgD | 1799854..1800321 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| CD200_RS09305 (CD200_09330) | flgG | 1800349..1801140 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| CD200_RS09310 (CD200_09335) | - | 1801183..1801398 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| CD200_RS09315 (CD200_09340) | fliL | 1801395..1801826 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| CD200_RS09320 (CD200_09345) | fliM | 1801862..1802860 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| CD200_RS09325 (CD200_09350) | fliY | 1802850..1803983 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| CD200_RS09330 (CD200_09355) | pilH | 1804010..1804372 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| CD200_RS09335 (CD200_09360) | fliZ | 1804442..1805059 (+) | 618 | WP_228767680.1 | flagella biosynthesis regulatory protein FliZ | - |
| CD200_RS09340 (CD200_09365) | fliP | 1805052..1805717 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| CD200_RS09345 (CD200_09370) | fliQ | 1805733..1806002 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| CD200_RS09350 (CD200_09375) | fliR | 1806010..1806786 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| CD200_RS09355 (CD200_09380) | flhB | 1806786..1807865 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=198684 CD200_RS09330 WP_003181796.1 1804010..1804372(+) (pilH) [Bacillus licheniformis strain CBA7132]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=198684 CD200_RS09330 WP_003181796.1 1804010..1804372(+) (pilH) [Bacillus licheniformis strain CBA7132]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |