Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BJG89_RS07065 | Genome accession | NZ_CP017466 |
| Coordinates | 1495692..1496666 (+) | Length | 324 a.a. |
| NCBI ID | WP_096809505.1 | Uniprot ID | - |
| Organism | Staphylococcus nepalensis strain JS11 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1490692..1501666
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJG89_RS07030 (BJG89_06920) | rpmG | 1490907..1491056 (+) | 150 | WP_019469354.1 | 50S ribosomal protein L33 | - |
| BJG89_RS07035 (BJG89_06925) | - | 1491200..1491742 (+) | 543 | WP_096809492.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| BJG89_RS07040 (BJG89_06930) | - | 1491754..1493202 (+) | 1449 | WP_096809494.1 | rhomboid family intramembrane serine protease | - |
| BJG89_RS07045 (BJG89_06935) | - | 1493189..1493395 (+) | 207 | WP_096809496.1 | YqgQ family protein | - |
| BJG89_RS07050 (BJG89_06940) | - | 1493695..1494681 (+) | 987 | WP_096809499.1 | glucokinase | - |
| BJG89_RS07055 (BJG89_06945) | - | 1494681..1495007 (+) | 327 | WP_096809501.1 | MTH1187 family thiamine-binding protein | - |
| BJG89_RS07060 (BJG89_06950) | - | 1495007..1495630 (+) | 624 | WP_096809503.1 | MBL fold metallo-hydrolase | - |
| BJG89_RS07065 (BJG89_06955) | comGA | 1495692..1496666 (+) | 975 | WP_096809505.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BJG89_RS07070 (BJG89_06960) | comGB | 1496638..1497705 (+) | 1068 | WP_229719007.1 | competence type IV pilus assembly protein ComGB | - |
| BJG89_RS07075 (BJG89_06965) | comGC | 1497726..1498043 (+) | 318 | WP_096809507.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BJG89_RS07080 (BJG89_06970) | comGD | 1498033..1498473 (+) | 441 | WP_096809509.1 | competence type IV pilus minor pilin ComGD | - |
| BJG89_RS07085 (BJG89_06975) | - | 1498454..1498747 (+) | 294 | WP_096809511.1 | hypothetical protein | - |
| BJG89_RS07090 (BJG89_06980) | - | 1498725..1499168 (+) | 444 | WP_096809514.1 | competence type IV pilus minor pilin ComGF | - |
| BJG89_RS07100 (BJG89_06990) | - | 1499346..1499840 (+) | 495 | WP_174221779.1 | shikimate kinase | - |
| BJG89_RS07105 (BJG89_06995) | gcvT | 1500017..1501108 (+) | 1092 | WP_096809520.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37182.42 Da Isoelectric Point: 9.5336
>NTDB_id=198561 BJG89_RS07065 WP_096809505.1 1495692..1496666(+) (comGA) [Staphylococcus nepalensis strain JS11]
MKLLFKNIFDKAIHENVTDVHFIPNQNKVKIKFRKKAFLVTVETIEINTYKKLLTYMKYQAGLDVSKHNAAQSGRYAYKL
KQLYYLRISTLPLSLGYESCVVRIIPQYFQKTAKIQSLNQLFKLMNKQQGLLLFSGPTGSGKSTLMYQMILHAKEQLNVN
IITVEDPVERLIEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIKDATIAKQVIHASLSGHLVLSTIHSNNCKGAL
CRLLEMGISVQELRQTILSIINQRLIVTSKEERSLIYEQLTREDIQFYFENQLTLPNTFQNLSFKLHEMAKEGEICEETL
NRYI
MKLLFKNIFDKAIHENVTDVHFIPNQNKVKIKFRKKAFLVTVETIEINTYKKLLTYMKYQAGLDVSKHNAAQSGRYAYKL
KQLYYLRISTLPLSLGYESCVVRIIPQYFQKTAKIQSLNQLFKLMNKQQGLLLFSGPTGSGKSTLMYQMILHAKEQLNVN
IITVEDPVERLIEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIKDATIAKQVIHASLSGHLVLSTIHSNNCKGAL
CRLLEMGISVQELRQTILSIINQRLIVTSKEERSLIYEQLTREDIQFYFENQLTLPNTFQNLSFKLHEMAKEGEICEETL
NRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=198561 BJG89_RS07065 WP_096809505.1 1495692..1496666(+) (comGA) [Staphylococcus nepalensis strain JS11]
TTGAAGTTATTATTTAAAAATATTTTTGACAAGGCAATTCATGAAAATGTTACAGATGTACATTTTATACCAAACCAAAA
TAAAGTAAAAATTAAATTCAGAAAGAAAGCATTTTTAGTTACAGTAGAAACAATAGAAATCAACACTTATAAGAAATTAC
TTACCTATATGAAATATCAAGCAGGATTAGATGTTTCTAAACACAATGCTGCCCAAAGTGGTAGATATGCATATAAATTA
AAACAACTATATTATTTAAGAATTTCTACTTTGCCATTGTCTTTAGGTTATGAGAGTTGTGTAGTTAGGATTATTCCTCA
ATATTTTCAAAAAACAGCAAAAATTCAAAGTCTCAATCAATTATTCAAATTAATGAATAAACAACAAGGTTTACTACTAT
TTAGTGGTCCAACTGGATCAGGAAAAAGCACATTAATGTATCAAATGATTTTACACGCAAAAGAACAATTAAATGTGAAT
ATTATAACAGTTGAAGATCCTGTGGAACGATTAATTGAAGGTATTACACAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGCTAACTCCTTTAAAGCAATTTTAAGATGTGACCCAGATATTATTCTTATAGGAGAAATTAAAGATGCAACTATCG
CTAAACAGGTCATACATGCTAGTTTAAGTGGGCATTTAGTGCTTTCAACTATCCACTCTAATAACTGTAAAGGCGCATTA
TGCAGGTTATTAGAAATGGGGATAAGTGTTCAAGAACTACGTCAAACGATCTTAAGTATTATTAATCAACGACTTATCGT
TACATCAAAAGAAGAGCGTTCATTAATATATGAACAACTAACACGAGAAGATATACAATTTTATTTCGAAAACCAGCTTA
CGCTTCCAAACACATTTCAAAATTTATCTTTTAAATTACACGAAATGGCTAAAGAAGGAGAAATTTGTGAAGAAACACTT
AATAGATATATTTAG
TTGAAGTTATTATTTAAAAATATTTTTGACAAGGCAATTCATGAAAATGTTACAGATGTACATTTTATACCAAACCAAAA
TAAAGTAAAAATTAAATTCAGAAAGAAAGCATTTTTAGTTACAGTAGAAACAATAGAAATCAACACTTATAAGAAATTAC
TTACCTATATGAAATATCAAGCAGGATTAGATGTTTCTAAACACAATGCTGCCCAAAGTGGTAGATATGCATATAAATTA
AAACAACTATATTATTTAAGAATTTCTACTTTGCCATTGTCTTTAGGTTATGAGAGTTGTGTAGTTAGGATTATTCCTCA
ATATTTTCAAAAAACAGCAAAAATTCAAAGTCTCAATCAATTATTCAAATTAATGAATAAACAACAAGGTTTACTACTAT
TTAGTGGTCCAACTGGATCAGGAAAAAGCACATTAATGTATCAAATGATTTTACACGCAAAAGAACAATTAAATGTGAAT
ATTATAACAGTTGAAGATCCTGTGGAACGATTAATTGAAGGTATTACACAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGCTAACTCCTTTAAAGCAATTTTAAGATGTGACCCAGATATTATTCTTATAGGAGAAATTAAAGATGCAACTATCG
CTAAACAGGTCATACATGCTAGTTTAAGTGGGCATTTAGTGCTTTCAACTATCCACTCTAATAACTGTAAAGGCGCATTA
TGCAGGTTATTAGAAATGGGGATAAGTGTTCAAGAACTACGTCAAACGATCTTAAGTATTATTAATCAACGACTTATCGT
TACATCAAAAGAAGAGCGTTCATTAATATATGAACAACTAACACGAGAAGATATACAATTTTATTTCGAAAACCAGCTTA
CGCTTCCAAACACATTTCAAAATTTATCTTTTAAATTACACGAAATGGCTAAAGAAGGAGAAATTTGTGAAGAAACACTT
AATAGATATATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.568 |
100 |
0.596 |
| comGA | Staphylococcus aureus N315 |
59.568 |
100 |
0.596 |