Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   S101392_RS21290 Genome accession   NZ_CP021921
Coordinates   4136714..4137562 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4131714..4142562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS21270 (S101392_04207) yyaE 4132248..4134251 (-) 2004 WP_088327384.1 molybdopterin-dependent oxidoreductase -
  S101392_RS21275 (S101392_04208) yyzM 4134302..4134508 (-) 207 WP_003226838.1 DUF951 family protein -
  S101392_RS21280 (S101392_04209) - 4134602..4135618 (-) 1017 WP_010886647.1 membrane protein -
  S101392_RS21285 (S101392_04210) yyaC 4136058..4136675 (+) 618 WP_003226834.1 spore protease YyaC -
  S101392_RS21290 (S101392_04211) spo0J 4136714..4137562 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  S101392_RS21295 (S101392_04212) soj 4137555..4138316 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  S101392_RS21300 (S101392_04213) yyaB 4138564..4139004 (+) 441 WP_088327385.1 PH domain-containing protein -
  S101392_RS21305 (S101392_04214) noc 4139055..4139906 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  S101392_RS21310 (S101392_04215) rsmG 4140028..4140747 (-) 720 WP_088327388.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=198535 S101392_RS21290 WP_003226832.1 4136714..4137562(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=198535 S101392_RS21290 WP_003226832.1 4136714..4137562(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGA
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387