Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   BJG87_RS04505 Genome accession   NZ_CP017463
Coordinates   930677..931720 (+) Length   347 a.a.
NCBI ID   WP_017637854.1    Uniprot ID   A0A654BBJ5
Organism   Staphylococcus pasteuri strain JS7     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 925677..936720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJG87_RS04480 (BJG87_04400) - 926409..927134 (+) 726 WP_046467432.1 type 1 glutamine amidotransferase -
  BJG87_RS04485 (BJG87_04405) - 927520..928506 (-) 987 WP_029056008.1 FUSC family protein -
  BJG87_RS04490 (BJG87_04410) map 928672..929427 (+) 756 WP_017637857.1 type I methionyl aminopeptidase -
  BJG87_RS04495 (BJG87_04415) - 929578..929964 (+) 387 WP_017637856.1 DUF2543 family protein -
  BJG87_RS04500 (BJG87_04420) liaF 929979..930680 (+) 702 WP_017637855.1 cell wall-active antibiotics response protein LiaF -
  BJG87_RS04505 (BJG87_04425) vraS 930677..931720 (+) 1044 WP_017637854.1 sensor histidine kinase Regulator
  BJG87_RS04510 (BJG87_04430) vraR 931710..932339 (+) 630 WP_017637853.1 two-component system response regulator VraR Regulator
  BJG87_RS04515 (BJG87_04435) - 932428..933666 (-) 1239 WP_017637852.1 YihY/virulence factor BrkB family protein -
  BJG87_RS04520 (BJG87_04440) - 933949..934233 (-) 285 WP_046467433.1 hypothetical protein -
  BJG87_RS04525 (BJG87_04445) - 934238..934702 (-) 465 WP_017637850.1 low molecular weight protein-tyrosine-phosphatase -
  BJG87_RS04530 (BJG87_04450) - 934864..935046 (+) 183 WP_037555624.1 DUF1128 domain-containing protein -
  BJG87_RS04535 (BJG87_04455) - 935060..936301 (+) 1242 WP_046467434.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40047.46 Da        Isoelectric Point: 6.2449

>NTDB_id=198514 BJG87_RS04505 WP_017637854.1 930677..931720(+) (vraS) [Staphylococcus pasteuri strain JS7]
MNHYIRAIGSMLILTYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILLCIIVGSVLAYKINQQNDWINS
QIERSIEGETVGINDQNIELYSETLEIYHTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPVLEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QEFKVPKGIEDHLFRITQEAISNTLRHSNGTRVTVELFNKQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=198514 BJG87_RS04505 WP_017637854.1 930677..931720(+) (vraS) [Staphylococcus pasteuri strain JS7]
ATGAATCACTATATAAGAGCAATAGGCTCTATGCTCATTTTAACGTATAGTATGTTAACCGCATTTTTATTTATTGATAA
AGTATTTGTTAACATCATCTATTTTCAAGGTATGTTCTATACACAGATTTTTGGCATACCTGTATTCTTATTTTTAAACA
TCATCGTGATATTATTATGTATCATTGTAGGTTCCGTTTTAGCTTATAAAATTAATCAACAGAATGACTGGATTAATTCT
CAAATAGAACGATCTATTGAAGGTGAAACAGTTGGTATCAATGACCAAAATATTGAATTATATAGTGAAACGCTGGAAAT
ATATCATACACTTGTACCATTAAATCAGGAATTACATCGATTAAGAATGAAAACACAAAACTTAACTAATGAAAACTACA
ACATGAACGATGTAAAAGTTAAAAAGATTATTGAAGACGAAAGACAACGTCTAGCTAGAGAATTACATGACTCAGTAAGT
CAACAATTATTCGCTGCGAGTATGATGTTATCAGCGATTAAAGAAACTAAATTAGAACCCCCATTAGACCAACAAATTCC
AGTTTTAGAGAAAATGGTACAAGATTCACAACTTGAAATGAGAGCTTTATTATTACATTTACGACCTCTAGGGTTGAAAG
ATAAGTCCTTAGGTGAAGGAATTAAAGATTTAGTTATAGATCTTCAAAAGAAAGTTCCGATGAAAGTTGTACATGAAATA
CAAGAATTTAAAGTTCCTAAAGGTATCGAAGATCATTTATTTAGAATTACTCAAGAAGCTATTTCAAATACATTAAGACA
TTCTAATGGCACTAGAGTGACGGTTGAACTATTTAATAAGCAAGATTATTTATTATTACGTATACAAGATAATGGTAAAG
GGTTTAATGTTGATGAAAAATTGGAACAAAGCTATGGTTTAAAAAATATGAGAGAACGTGCATTAGAAATTGGTGCTACA
TTCCATATCGTTTCGTTACCTGATTCCGGAACACGTATAGAAGTTAAAGCCCCATTGAACAAGGAGGATTCTTATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A654BBJ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

94.524

100

0.945


Multiple sequence alignment