Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   S101392_RS18070 Genome accession   NZ_CP021921
Coordinates   3498220..3498933 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3493220..3503933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS18050 (S101392_03574) ghrB 3493365..3494342 (+) 978 WP_072557265.1 D-glycerate dehydrogenase -
  S101392_RS18055 (S101392_03575) psdB 3494379..3496319 (-) 1941 WP_088327037.1 lantibiotic ABC transporter permease PsdB -
  S101392_RS18060 (S101392_03576) psdA 3496294..3497073 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  S101392_RS18065 (S101392_03577) psdS 3497156..3498226 (-) 1071 WP_088327039.1 two-component sensor histidine kinase PsdS -
  S101392_RS18070 (S101392_03578) braR 3498220..3498933 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  S101392_RS18075 (S101392_03579) - 3499080..3499289 (+) 210 WP_014665489.1 hypothetical protein -
  S101392_RS18080 (S101392_03580) yvcN 3499325..3500089 (-) 765 WP_088327041.1 arylamine N-acetyltransferase -
  S101392_RS18085 (S101392_03581) crh 3500090..3500347 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  S101392_RS18090 (S101392_03582) whiA 3500371..3501321 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  S101392_RS18095 (S101392_03583) mgfK 3501344..3502297 (-) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  S101392_RS18100 (S101392_03584) rapZ 3502299..3503186 (-) 888 WP_003243903.1 RNase adapter RapZ -
  S101392_RS18105 (S101392_03585) rppI 3503211..3503687 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=198514 S101392_RS18070 WP_003244535.1 3498220..3498933(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=198514 S101392_RS18070 WP_003244535.1 3498220..3498933(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101392]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment