Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   S101392_RS15680 Genome accession   NZ_CP021921
Coordinates   3035292..3035987 (-) Length   231 a.a.
NCBI ID   WP_088326791.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3030292..3040987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS15660 (S101392_03106) yttA 3030719..3031465 (+) 747 WP_088326785.1 LMBR1 domain-containing protein -
  S101392_RS15665 (S101392_03107) bceB 3031502..3033442 (-) 1941 WP_088326787.1 bacitracin ABC transporter permease BceB -
  S101392_RS15670 (S101392_03108) bceA 3033432..3034193 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  S101392_RS15675 (S101392_03109) bceS 3034295..3035299 (-) 1005 WP_088326789.1 two-component sensor histidine kinase BceS -
  S101392_RS15680 (S101392_03110) braR 3035292..3035987 (-) 696 WP_088326791.1 two-component response regulator BceR Regulator
  S101392_RS15685 (S101392_03111) ytrF 3036084..3037394 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  S101392_RS15690 (S101392_03112) ytrE 3037384..3038079 (-) 696 WP_088326793.1 ABC transporter ATP-binding protein YtrE -
  S101392_RS15695 (S101392_03113) ytrD 3038094..3039071 (-) 978 WP_088326794.1 ABC transporter permease YtrD -
  S101392_RS15700 (S101392_03114) - 3039103..3040089 (-) 987 WP_088326796.1 ABC transporter permease subunit -
  S101392_RS15705 (S101392_03115) ytrB 3040083..3040961 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26881.72 Da        Isoelectric Point: 5.3731

>NTDB_id=198504 S101392_RS15680 WP_088326791.1 3035292..3035987(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=198504 S101392_RS15680 WP_088326791.1 3035292..3035987(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101392]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAACGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377