Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BIZ51_RS09975 | Genome accession | NZ_CP017458 |
| Coordinates | 2232734..2233048 (-) | Length | 104 a.a. |
| NCBI ID | WP_027229196.1 | Uniprot ID | A0A2S6EXS5 |
| Organism | Legionella pneumophila subsp. fraseri strain Dallas 1E | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2227734..2238048
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ51_RS09950 (BIZ51_09840) | - | 2228143..2228643 (-) | 501 | WP_027229191.1 | hypothetical protein | - |
| BIZ51_RS09955 (BIZ51_09845) | - | 2229135..2229995 (+) | 861 | WP_027229192.1 | polysaccharide deacetylase family protein | - |
| BIZ51_RS09960 (BIZ51_09850) | - | 2230129..2231325 (-) | 1197 | WP_027229193.1 | murein transglycosylase A | - |
| BIZ51_RS09965 (BIZ51_09855) | lpp1976 | 2231435..2231992 (-) | 558 | WP_027229194.1 | hypothetical protein | Machinery gene |
| BIZ51_RS09970 (BIZ51_09860) | lpp1977 | 2231989..2232732 (-) | 744 | WP_027229195.1 | PilW family protein | Machinery gene |
| BIZ51_RS09975 (BIZ51_09865) | lpp1978 | 2232734..2233048 (-) | 315 | WP_027229196.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BIZ51_RS09980 (BIZ51_09870) | hisC | 2233209..2234318 (+) | 1110 | WP_027229197.1 | histidinol-phosphate transaminase | - |
| BIZ51_RS09985 (BIZ51_09875) | - | 2234356..2234697 (+) | 342 | WP_027229198.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BIZ51_RS09990 (BIZ51_09880) | secF | 2234872..2235789 (-) | 918 | WP_027229199.1 | protein translocase subunit SecF | - |
| BIZ51_RS09995 (BIZ51_09885) | secD | 2235802..2237658 (-) | 1857 | WP_027229200.1 | protein translocase subunit SecD | - |
| BIZ51_RS10000 (BIZ51_09890) | yajC | 2237680..2238015 (-) | 336 | WP_027229201.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12391.56 Da Isoelectric Point: 9.5369
>NTDB_id=198421 BIZ51_RS09975 WP_027229196.1 2232734..2233048(-) (lpp1978) [Legionella pneumophila subsp. fraseri strain Dallas 1E]
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
MNKQKGFTLMEILMSLMLMTTVVLMLVEQQLKTRDLINHLIWRIHGSQFLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKNQSIIRSYDLDVN
Nucleotide
Download Length: 315 bp
>NTDB_id=198421 BIZ51_RS09975 WP_027229196.1 2232734..2233048(-) (lpp1978) [Legionella pneumophila subsp. fraseri strain Dallas 1E]
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAATACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATTTAATCAATCATCTTATATGGAGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATCAGTGAGAATAGATTACCTCTGCCACCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAGAAAAACCAGTCAATTATTCGTTCCTATGATCTGGACGTTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
90.385 |
100 |
0.904 |
| lpp1978 | Legionella pneumophila str. Paris |
90.385 |
100 |
0.904 |