Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CD795_RS09975 Genome accession   NZ_CP021907
Coordinates   1963143..1963961 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain Seattle 1945 isolate G478     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1958143..1968961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD795_RS09950 - 1959236..1960213 (+) 978 WP_000379091.1 metal-dependent hydrolase -
  CD795_RS09960 - 1960474..1961310 (-) 837 WP_000886472.1 hypothetical protein -
  CD795_RS09965 - 1961319..1962836 (-) 1518 WP_000535849.1 ATP-binding cassette domain-containing protein -
  CD795_RS09970 - 1962851..1963165 (-) 315 WP_000435806.1 YfhH family protein -
  CD795_RS09975 recX 1963143..1963961 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  CD795_RS09980 sgtB 1964222..1965031 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  CD795_RS09985 - 1965372..1965887 (-) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  CD795_RS09990 - 1966017..1966178 (-) 162 WP_001005407.1 SE1561 family protein -
  CD795_RS09995 yfkAB 1966402..1967553 (+) 1152 WP_001089600.1 radical SAM/CxCxxxxC motif protein YfkAB -
  CD795_RS10000 - 1967813..1968343 (-) 531 WP_000184382.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=198372 CD795_RS09975 WP_001124422.1 1963143..1963961(-) (recX) [Staphylococcus aureus strain Seattle 1945 isolate G478]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=198372 CD795_RS09975 WP_001124422.1 1963143..1963961(-) (recX) [Staphylococcus aureus strain Seattle 1945 isolate G478]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996