Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | BIZ52_RS00695 | Genome accession | NZ_CP017457 |
| Coordinates | 158576..159268 (+) | Length | 230 a.a. |
| NCBI ID | WP_027268217.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain Detroit-1 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 153576..164268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ52_RS00675 | - | 154197..154373 (-) | 177 | WP_011945326.1 | dodecin domain-containing protein | - |
| BIZ52_RS00680 (BIZ52_00680) | - | 154551..157019 (+) | 2469 | WP_027268216.1 | hypothetical protein | - |
| BIZ52_RS00685 (BIZ52_00685) | dapB | 157123..157854 (-) | 732 | WP_014843074.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| BIZ52_RS00690 (BIZ52_00690) | - | 158034..158219 (-) | 186 | WP_014843075.1 | hypothetical protein | - |
| BIZ52_RS00695 (BIZ52_00695) | rocC | 158576..159268 (+) | 693 | WP_027268217.1 | ProQ/FinO family protein | Regulator |
| BIZ52_RS00700 (BIZ52_00700) | - | 159269..160336 (+) | 1068 | WP_014843077.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25829.71 Da Isoelectric Point: 10.6432
>NTDB_id=198350 BIZ52_RS00695 WP_027268217.1 158576..159268(+) (rocC) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MRKQALHPRTAVINKAQKNQSKRARSDALSWLAVNFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVEEVTEEEAEHASMKIKKRVEKSVKNARKLVNAKAANHSHVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE
MRKQALHPRTAVINKAQKNQSKRARSDALSWLAVNFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVEEVTEEEAEHASMKIKKRVEKSVKNARKLVNAKAANHSHVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE
Nucleotide
Download Length: 693 bp
>NTDB_id=198350 BIZ52_RS00695 WP_027268217.1 158576..159268(+) (rocC) [Legionella pneumophila subsp. fraseri strain Detroit-1]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGTGCGCGATCTGA
CGCATTATCATGGCTTGCGGTTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGAGGA
GGTTACTGAGGAAGAAGCGGAACATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
TAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGTGCGCGATCTGA
CGCATTATCATGGCTTGCGGTTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGAGGA
GGTTACTGAGGAAGAAGCGGAACATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
TAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
96.957 |
100 |
0.97 |