Detailed information
Bioinformatically predicted
Overview
| Name | Cj0683 | Type | Machinery gene |
| Locus tag | CJJRM3420_RS03300 | Genome accession | NZ_CP017456 |
| Coordinates | 633509..633946 (+) | Length | 145 a.a. |
| NCBI ID | WP_002852324.1 | Uniprot ID | A0AA44HIV8 |
| Organism | Campylobacter jejuni subsp. jejuni str. RM3420 | ||
| Function | initialization of DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 628509..638946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJJRM3420_RS03280 (CjjRM3420_0643) | kdpD | 628997..630928 (+) | 1932 | WP_002856839.1 | sensor histidine kinase | - |
| CJJRM3420_RS03285 (CjjRM3420_0644) | uvrB | 630923..632896 (-) | 1974 | WP_002856888.1 | excinuclease ABC subunit UvrB | - |
| CJJRM3420_RS03290 (CjjRM3420_0645) | - | 633050..633280 (+) | 231 | WP_002852327.1 | hypothetical protein | - |
| CJJRM3420_RS03295 (CjjRM3420_0646) | - | 633270..633512 (+) | 243 | WP_002854947.1 | hypothetical protein | - |
| CJJRM3420_RS03300 (CjjRM3420_0647) | Cj0683 | 633509..633946 (+) | 438 | WP_002852324.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CJJRM3420_RS03305 (CjjRM3420_0648) | priA | 633928..635781 (+) | 1854 | WP_002856756.1 | primosomal protein N' | - |
| CJJRM3420_RS03310 | cipA | 635791..637185 (-) | 1395 | WP_002896028.1 | DUF2972 domain-containing protein | - |
| CJJRM3420_RS03315 (CjjRM3420_0650) | ispG | 637331..638404 (+) | 1074 | WP_002857157.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 16765.76 Da Isoelectric Point: 8.0993
>NTDB_id=198330 CJJRM3420_RS03300 WP_002852324.1 633509..633946(+) (Cj0683) [Campylobacter jejuni subsp. jejuni str. RM3420]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Nucleotide
Download Length: 438 bp
>NTDB_id=198330 CJJRM3420_RS03300 WP_002852324.1 633509..633946(+) (Cj0683) [Campylobacter jejuni subsp. jejuni str. RM3420]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0683 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
100 |
100 |
1 |