Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   S100333_RS15620 Genome accession   NZ_CP021892
Coordinates   2935045..2935740 (-) Length   231 a.a.
NCBI ID   WP_069837705.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM100333     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2930045..2940740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100333_RS15600 (S100333_03188) yttA 2930472..2931218 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  S100333_RS15605 (S100333_03189) bceB 2931255..2933195 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  S100333_RS15610 (S100333_03190) bceA 2933185..2933946 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  S100333_RS15615 (S100333_03191) bceS 2934048..2935052 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  S100333_RS15620 (S100333_03192) braR 2935045..2935740 (-) 696 WP_069837705.1 two-component response regulator BceR Regulator
  S100333_RS15625 (S100333_03193) ytrF 2935837..2937147 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  S100333_RS15630 (S100333_03194) ytrE 2937137..2937832 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  S100333_RS15635 (S100333_03195) - 2937847..2938824 (-) 978 WP_088272441.1 ABC transporter permease -
  S100333_RS15640 (S100333_03196) ytrC 2938854..2939840 (-) 987 WP_088272442.1 ABC transporter permease YtrC -
  S100333_RS15645 (S100333_03197) ytrB 2939834..2940712 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=198028 S100333_RS15620 WP_069837705.1 2935045..2935740(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=198028 S100333_RS15620 WP_069837705.1 2935045..2935740(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM100333]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAAGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment