Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BI380_RS16525 Genome accession   NZ_CP017420
Coordinates   3529872..3530270 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia tsuruhatensis strain CM13     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3524872..3535270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI380_RS16510 (BI380_16510) - 3526693..3528945 (-) 2253 WP_070080646.1 methyl-accepting chemotaxis protein -
  BI380_RS16515 (BI380_16515) - 3528964..3529491 (-) 528 WP_016447935.1 chemotaxis protein CheW -
  BI380_RS16520 (BI380_16520) - 3529507..3529872 (-) 366 WP_016447936.1 response regulator -
  BI380_RS16525 (BI380_16525) pilG 3529872..3530270 (-) 399 WP_016447937.1 response regulator Regulator
  BI380_RS33385 - 3530318..3530470 (-) 153 WP_017406135.1 rubredoxin -
  BI380_RS16530 (BI380_16530) thiD 3530586..3531545 (+) 960 WP_070080647.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  BI380_RS16535 (BI380_16535) hemL 3531620..3532936 (+) 1317 WP_370690594.1 glutamate-1-semialdehyde 2,1-aminomutase -
  BI380_RS16540 (BI380_16540) - 3532987..3533586 (-) 600 WP_016453188.1 DNA-3-methyladenine glycosylase I -
  BI380_RS16545 (BI380_16545) - 3533589..3534064 (-) 476 Protein_3411 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=198008 BI380_RS16525 WP_016447937.1 3529872..3530270(-) (pilG) [Delftia tsuruhatensis strain CM13]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=198008 BI380_RS16525 WP_016447937.1 3529872..3530270(-) (pilG) [Delftia tsuruhatensis strain CM13]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAGGTCAACGATTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTGCT
GACACGCCTGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment