Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   S100761_RS21050 Genome accession   NZ_CP021889
Coordinates   3978171..3979019 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain SRCM100761     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3973171..3984019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100761_RS21030 (S100761_04183) yyaE 3973704..3975707 (-) 2004 WP_087614843.1 molybdopterin-dependent oxidoreductase -
  S100761_RS21035 (S100761_04184) yyzM 3975758..3975964 (-) 207 WP_003226838.1 DUF951 family protein -
  S100761_RS21040 (S100761_04185) - 3976058..3977074 (-) 1017 WP_010886647.1 membrane protein -
  S100761_RS21045 (S100761_04186) yyaC 3977515..3978132 (+) 618 WP_015715079.1 spore protease YyaC -
  S100761_RS21050 (S100761_04187) spo0J 3978171..3979019 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  S100761_RS21055 (S100761_04188) soj 3979012..3979773 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  S100761_RS21060 (S100761_04189) yyaB 3980021..3980461 (+) 441 WP_076457319.1 PH domain-containing protein -
  S100761_RS21065 (S100761_04190) noc 3980512..3981363 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  S100761_RS21070 (S100761_04191) rsmG 3981485..3982204 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=197913 S100761_RS21050 WP_003226832.1 3978171..3979019(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM100761]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=197913 S100761_RS21050 WP_003226832.1 3978171..3979019(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM100761]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCTATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTCTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTCGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTCCTTGGCTTGAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AATTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387