Detailed information NTG0197866

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: S100761_RS13320
• Genome accession: NZ_CP021889
• Coordinates: 2474002..2475129 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100761
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2469002..2480129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100761_RS21700	-	2469048..2469260 (-)	213	Protein_2579	recombinase family protein	-
S100761_RS13300 (S100761_02648)	fumC	2469479..2470867 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
S100761_RS13305 (S100761_02649)	-	2471034..2471924 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
S100761_RS13310 (S100761_02650)	-	2472867..2473262 (+)	396	WP_046160622.1	VOC family protein	-
S100761_RS13320 (S100761_02652)	rapC	2474002..2475129 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
S100761_RS21855	-	2475311..2477237 (+)	1927	Protein_2584	T7SS effector LXG polymorphic toxin	-
S100761_RS13330 (S100761_02656)	-	2477251..2477538 (+)	288	WP_014480331.1	hypothetical protein	-
S100761_RS13335 (S100761_02657)	-	2477941..2478381 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
S100761_RS13340 (S100761_02658)	-	2478480..2478932 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
S100761_RS13345 (S100761_02659)	cdiI	2479029..2479388 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
S100761_RS13350 (S100761_02660)	-	2479493..2479972 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=197866 S100761_RS13320 WP_014480328.1 2474002..2475129(-) (rapC) [Bacillus subtilis subsp. subtilis strain SRCM100761]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=197866 S100761_RS13320 WP_014480328.1 2474002..2475129(-) (rapC) [Bacillus subtilis subsp. subtilis strain SRCM100761]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397