Detailed information NTG0197776

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: S100761_RS01670
• Genome accession: NZ_CP021889
• Coordinates: 300026..301147 (+)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100761
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 295026..306147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100761_RS01645 (S100761_00320)	ycdA	295034..296098 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
S100761_RS21115	-	296121..296252 (-)	132	WP_003246334.1	hypothetical protein	-
S100761_RS01650 (S100761_00321)	ycdB	296426..297844 (+)	1419	WP_087614255.1	YcdB/YcdC domain-containing protein	-
S100761_RS01660 (S100761_00322)	ycdC	298031..299392 (+)	1362	WP_046160119.1	YcdB/YcdC domain-containing protein	-
S100761_RS01665 (S100761_00323)	cwlK	299400..299903 (-)	504	WP_046160022.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
S100761_RS01670 (S100761_00324)	rapF	300026..301147 (+)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
S100761_RS01675 (S100761_00325)	ycdF	301256..302032 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
S100761_RS01680 (S100761_00326)	ycdG	302057..303742 (+)	1686	WP_046160023.1	alpha-glucosidase	-
S100761_RS01685 (S100761_00327)	znuA	303930..304889 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
S100761_RS01690 (S100761_00328)	znuC	304944..305639 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=197776 S100761_RS01670 WP_003234740.1 300026..301147(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM100761]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=197776 S100761_RS01670 WP_003234740.1 300026..301147(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM100761]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405