Detailed information NTG0197702

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AM384_RS05190
• Genome accession: NZ_CP021879
• Coordinates: 1019350..1020375 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AR_0137
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1014350..1025375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM384_RS05170 (AM384_05155)	metJ	1015411..1015728 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AM384_RS05175 (AM384_05160)	yiiX	1015912..1016520 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AM384_RS05180 (AM384_05165)	rpmE	1016581..1016793 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AM384_RS05185 (AM384_05170)	priA	1016996..1019194 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AM384_RS05190 (AM384_05175)	cytR	1019350..1020375 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AM384_RS05195 (AM384_05180)	ftsN	1020467..1021426 (+)	960	WP_000068828.1	cell division protein FtsN	-
AM384_RS05200 (AM384_05185)	hslV	1021519..1022049 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AM384_RS05205 (AM384_05190)	hslU	1022059..1023390 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AM384_RS05210 (AM384_05195)	menA	1023457..1024383 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AM384_RS05215 (AM384_05200)	rraA	1024476..1024961 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AM384_RS05220 (AM384_05205)	zapB	1025046..1025291 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=197702 AM384_RS05190 WP_000644904.1 1019350..1020375(+) (cytR) [Escherichia coli strain AR_0137]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=197702 AM384_RS05190 WP_000644904.1 1019350..1020375(+) (cytR) [Escherichia coli strain AR_0137]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628