Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BB165_RS02380 Genome accession   NZ_CP021870
Coordinates   398905..399681 (-) Length   258 a.a.
NCBI ID   WP_000704977.1    Uniprot ID   P59209
Organism   Streptococcus agalactiae strain SG-M4     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 393905..404681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB165_RS02375 (BB165_02375) - 398288..398821 (-) 534 WP_001239184.1 DUF402 domain-containing protein -
  BB165_RS02380 (BB165_02380) recX 398905..399681 (-) 777 WP_000704977.1 recombination regulator RecX Regulator
  BB165_RS02385 (BB165_02385) rlmD 399780..401135 (+) 1356 WP_001103623.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  BB165_RS02390 (BB165_02390) - 401402..402166 (+) 765 WP_000586351.1 nucleoside phosphorylase -
  BB165_RS02395 (BB165_02395) - 402200..402628 (+) 429 WP_000267396.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30697.61 Da        Isoelectric Point: 9.7605

>NTDB_id=197609 BB165_RS02380 WP_000704977.1 398905..399681(-) (recX) [Streptococcus agalactiae strain SG-M4]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=197609 BB165_RS02380 WP_000704977.1 398905..399681(-) (recX) [Streptococcus agalactiae strain SG-M4]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAGTTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATATGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAAGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAATTTTCAAGACTTAGCATCTAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACGAAAGGATT
TGATTACCAGATAGCACACACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTATCAAAAAAATATGATCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59209

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

38.314

100

0.388

Multiple sequence alignment