Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSBS38_RS04710 Genome accession   NZ_CP017314
Coordinates   923267..924061 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS38     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 918267..929061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSBS38_RS04680 (BSBS38_00953) sxzA 919106..920137 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  BSBS38_RS04685 (BSBS38_00954) yfhB 920252..921133 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  BSBS38_RS04690 (BSBS38_00955) yfhC 921221..921805 (+) 585 WP_032723010.1 nitroreductase family protein -
  BSBS38_RS04695 (BSBS38_00956) yfhD 921844..922035 (-) 192 WP_003233561.1 YfhD family protein -
  BSBS38_RS04700 (BSBS38_00957) yfhE 922102..922212 (-) 111 WP_003223230.1 YfhE family protein -
  BSBS38_RS04705 (BSBS38_00958) yfhF 922267..923178 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  BSBS38_RS04710 (BSBS38_00959) recX 923267..924061 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  BSBS38_RS04715 (BSBS38_00960) yfhH 924063..924376 (+) 314 Protein_874 YfhH family protein -
  BSBS38_RS04725 (BSBS38_00962) yfhI 924519..925712 (+) 1194 WP_080478396.1 MFS transporter -
  BSBS38_RS04730 (BSBS38_00963) sspK 925744..925896 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BSBS38_RS04735 (BSBS38_00964) yfhJ 926021..926290 (+) 270 WP_003243789.1 YfhJ family protein -
  BSBS38_RS04745 (BSBS38_00966) - 926401..927550 (+) 1150 Protein_878 IS3 family transposase -
  BSBS38_RS04750 (BSBS38_00967) yfhK 927724..928242 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  BSBS38_RS04755 (BSBS38_00968) spdL 928327..928659 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=197597 BSBS38_RS04710 WP_014479217.1 923267..924061(+) (recX) [Bacillus subtilis strain BS38]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=197597 BSBS38_RS04710 WP_014479217.1 923267..924061(+) (recX) [Bacillus subtilis strain BS38]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment