Detailed information NTG0197410

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: WH25_RS04115
• Genome accession: NZ_CP017295
• Coordinates: 851499..852542 (+)
• Length: 347 a.a.
• NCBI ID: WP_046165911.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain IE35
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 846499..857542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WH25_RS04075 (WH25_04075)	-	846673..846957 (+)	285	WP_046165918.1	type II toxin-antitoxin system RelE family toxin	-
WH25_RS04080 (WH25_04080)	-	847039..847332 (-)	294	WP_046165917.1	DUF5960 family protein	-
WH25_RS04085 (WH25_04085)	-	847310..847684 (-)	375	WP_046165916.1	hypothetical protein	-
WH25_RS04090 (WH25_04090)	-	847681..849096 (-)	1416	WP_046165915.1	Y-family DNA polymerase	-
WH25_RS04095 (WH25_04095)	-	849099..849776 (-)	678	WP_046165914.1	helix-turn-helix domain-containing protein	-
WH25_RS04100 (WH25_04100)	-	849919..850407 (+)	489	WP_046165913.1	YcxB family protein	-
WH25_RS04105 (WH25_04105)	rsmD	850480..851028 (+)	549	WP_179943974.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WH25_RS04110 (WH25_04110)	coaD	851018..851512 (+)	495	WP_046165912.1	pantetheine-phosphate adenylyltransferase	-
WH25_RS04115 (WH25_04115)	sepM	851499..852542 (+)	1044	WP_046165911.1	SepM family pheromone-processing serine protease	Regulator
WH25_RS04120 (WH25_04120)	-	852714..853250 (+)	537	WP_045634724.1	YutD family protein	-
WH25_RS04125 (WH25_04125)	rlmN	853260..854348 (+)	1089	WP_045634723.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
WH25_RS04130 (WH25_04130)	-	854335..854874 (+)	540	WP_046165910.1	VanZ family protein	-
WH25_RS04135 (WH25_04135)	trpB	855241..856422 (+)	1182	WP_046165909.1	tryptophan synthase subunit beta	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38023.59 Da
• Isoelectric Point: 6.1221

>NTDB_id=197410 WH25_RS04115 WP_046165911.1 851499..852542(+) (sepM) [Streptococcus gordonii strain IE35]
MKKISVYKWPIIIFSSLILLVVSLTVPLPYYIEVPGGAEDIRKVLLVDNKEDKEAGAYEFVTVGVQRATFAHLVYAWLTD
FTDIYSAEEMTGGSSDQEFIRINQFYMETSQNMAKYQGLKTAGKDISMKYLGVYVLQVAKDSTFKGILNIADTVTGVNDK
TFDSSEELVKYVNSQKLGDKVKVTYQEDGQEKSATGKIIKLENGKNGIGISLIDRTEVTSNIPIEFTTEGIGGPSAGLMF
SLSIYTQLADPTLRDGRVIAGTGSINRDGEVGDIGGIDKKVVSAAKSGASIFFAPNNPVTKEMKKIDPKAKTNYETAVEA
AKKIKTDMKIVPVKTLQDAIDYLKNNK

Nucleotide

• Length: 1044 bp

>NTDB_id=197410 WH25_RS04115 WP_046165911.1 851499..852542(+) (sepM) [Streptococcus gordonii strain IE35]
ATGAAAAAAATTAGTGTTTATAAATGGCCCATTATTATTTTTTCAAGCTTGATTTTGCTTGTCGTATCTTTGACGGTTCC
TTTACCATACTATATTGAAGTTCCTGGCGGTGCAGAAGATATTCGAAAGGTCTTGCTGGTTGACAATAAGGAAGATAAGG
AAGCTGGGGCCTACGAGTTTGTGACAGTTGGAGTTCAACGAGCAACCTTTGCTCATCTTGTCTATGCGTGGCTGACTGAT
TTCACGGATATCTACTCTGCTGAAGAAATGACTGGTGGATCGTCGGATCAAGAATTTATTCGAATCAATCAGTTTTATAT
GGAAACATCCCAAAATATGGCCAAGTATCAAGGCTTGAAAACAGCTGGAAAAGATATTAGCATGAAATATCTGGGCGTCT
ATGTTTTGCAAGTTGCAAAAGATTCGACTTTTAAGGGAATTTTGAATATTGCGGACACGGTGACGGGAGTTAATGACAAG
ACTTTTGACAGTTCAGAAGAATTAGTGAAATATGTTAATTCGCAGAAATTAGGAGATAAGGTTAAGGTCACTTACCAGGA
AGATGGCCAAGAAAAATCAGCGACTGGAAAGATTATTAAGCTAGAAAATGGTAAAAACGGAATCGGTATTAGCTTAATCG
ATAGAACAGAAGTTACTAGTAACATTCCGATTGAATTTACTACAGAAGGCATTGGAGGACCTAGTGCGGGTCTCATGTTT
AGCTTGTCAATCTATACACAACTTGCAGATCCAACCTTACGAGATGGACGTGTGATTGCAGGTACAGGAAGTATCAACCG
TGATGGAGAAGTTGGTGATATTGGTGGGATTGATAAGAAAGTTGTCTCAGCAGCTAAAAGTGGTGCCAGCATCTTCTTTG
CTCCCAATAATCCTGTAACAAAAGAAATGAAAAAAATCGATCCAAAAGCAAAGACAAACTATGAAACTGCAGTTGAGGCT
GCTAAAAAGATTAAAACAGATATGAAAATTGTTCCTGTTAAAACCTTACAGGATGCCATTGATTATCTTAAGAACAATAA
ATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (129-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-315)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	61.272	99.712	0.611