Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | WH25_RS00790 | Genome accession | NZ_CP017295 |
| Coordinates | 141843..144272 (-) | Length | 809 a.a. |
| NCBI ID | WP_046164582.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain IE35 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 136843..149272
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WH25_RS00765 (WH25_00765) | dusB | 136967..137944 (+) | 978 | WP_041789808.1 | tRNA dihydrouridine synthase DusB | - |
| WH25_RS00770 (WH25_00770) | - | 137983..138657 (-) | 675 | WP_046164578.1 | DUF6287 domain-containing protein | - |
| WH25_RS00775 (WH25_00775) | - | 138893..139681 (-) | 789 | WP_046164579.1 | NUDIX domain-containing protein | - |
| WH25_RS00780 (WH25_00780) | pnuC | 139725..140540 (-) | 816 | WP_046164580.1 | nicotinamide riboside transporter PnuC | - |
| WH25_RS00785 (WH25_00785) | - | 140562..141620 (-) | 1059 | WP_046164581.1 | AAA family ATPase | - |
| WH25_RS00790 (WH25_00790) | clpC | 141843..144272 (-) | 2430 | WP_046164582.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| WH25_RS00795 (WH25_00795) | - | 144279..144737 (-) | 459 | WP_008809921.1 | CtsR family transcriptional regulator | - |
| WH25_RS00800 (WH25_00800) | - | 145056..145406 (+) | 351 | WP_008809922.1 | hypothetical protein | - |
| WH25_RS00805 (WH25_00805) | tsf | 145514..146557 (-) | 1044 | WP_012130978.1 | translation elongation factor Ts | - |
| WH25_RS00810 (WH25_00810) | rpsB | 146636..147418 (-) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90086.82 Da Isoelectric Point: 6.5943
>NTDB_id=197394 WH25_RS00790 WP_046164582.1 141843..144272(-) (clpC) [Streptococcus gordonii strain IE35]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIVSDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALAFGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIVSDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALAFGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLGRLIKEENQPLSSNLKVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMVKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=197394 WH25_RS00790 WP_046164582.1 141843..144272(-) (clpC) [Streptococcus gordonii strain IE35]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAATGATTATCCACTGGAAA
TCGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCCTATACGCTATTGTTAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTCGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTTTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAACGTATGAACAATATCATTGACGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAGCCAAGTGTAGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCTGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGCCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGACATTTTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGGCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGGGTTGGTAAGACCGAGTTAGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCCAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGGCCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACAAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACGGTCGGCTTTGGAGCGCGCGACATTCGCTTGGATCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAATGATTATCCACTGGAAA
TCGATCATTTTGAGGATGCTGCTTACCATGTAGTAGGAAAGTCTTATCAGAAGGAAGGGCAATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCCTATACGCTATTGTTAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGGAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTCGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTTTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCGCACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTGGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAACGTATGAACAATATCATTGACGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAGCCAAGTGTAGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCTGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAGCTTGGCCGCTTGATCAAGGAAGAAAATCAACCTCTATCAAGTAATTTGAAGGTAGAGGAAACAGACATTTTG
ACAACTCTCAGTCGCCTGTCTGGTATTCCAGTCCAAAAATTGACTCAGACAGATGCTAAAAAATATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGGCAAGATGAAGCTATATCAGCTATTAGTCGCGCAATTCGTCGTAATCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGGGTTGGTAAGACCGAGTTAGCTAAGGCT
CTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCAGCCAG
TCGTCTCAACGGAGCGCCTCCAGGTTATGTCGGCTATGAAGAAGGGGGCGAATTGACAGAGAAAGTTCGCAACAGGCCTT
ATTCTGTTCTCTTATTTGACGAAGTTGAAAAAGCCCATCCGGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTGACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACAAGCAATCTAGGAGCAACCAG
TTTGCGTGATGATAAGACGGTCGGCTTTGGAGCGCGCGACATTCGCTTGGATCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCAGCAGAC
CATATGCAGGAGGTTGTCAAAGTGATGGTTAAACCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGATATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTAACTGGTGATTTACAAGCTGGTCAGACCTTGAAAGTGGGGGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae D39 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae TIGR4 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus mutans UA159 |
67.75 |
98.888 |
0.67 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.176 |
100 |
0.667 |
| clpC | Streptococcus thermophilus LMD-9 |
66.054 |
100 |
0.666 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.626 |
100 |
0.503 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.94 |
100 |
0.461 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus mutans UA159 |
47.436 |
77.132 |
0.366 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |