Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BB164_RS07515 Genome accession   NZ_CP021867
Coordinates   1404627..1405067 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain SG-M25     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399627..1410067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB164_RS07500 (BB164_07485) - 1400285..1400911 (-) 627 WP_000449644.1 GTP pyrophosphokinase -
  BB164_RS07505 (BB164_07490) rcrQ 1401019..1402773 (-) 1755 WP_000851087.1 ABC transporter ATP-binding protein Regulator
  BB164_RS07510 (BB164_07495) rcrP 1402763..1404580 (-) 1818 WP_000481813.1 ABC transporter ATP-binding protein Regulator
  BB164_RS07515 (BB164_07500) rcrR 1404627..1405067 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BB164_RS07520 (BB164_07505) - 1405336..1407408 (+) 2073 WP_000726933.1 surface-anchored 5'-nucleotidase -
  BB164_RS07525 (BB164_07510) - 1407445..1407855 (-) 411 WP_000594935.1 peptide deformylase -
  BB164_RS07530 (BB164_07515) gdhA 1407925..1409274 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  BB164_RS07535 (BB164_07520) - 1409442..1409951 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=197344 BB164_RS07515 WP_000431168.1 1404627..1405067(-) (rcrR) [Streptococcus agalactiae strain SG-M25]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=197344 BB164_RS07515 WP_000431168.1 1404627..1405067(-) (rcrR) [Streptococcus agalactiae strain SG-M25]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCGTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411