Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   BH714_RS03770 Genome accession   NZ_CP017279
Coordinates   820019..820645 (+) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain EN-119     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 815019..825645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BH714_RS03750 (BH714_03750) - 815412..817172 (-) 1761 WP_040017074.1 AAA family ATPase -
  BH714_RS03755 (BH714_03755) matP 817359..817811 (+) 453 WP_014169429.1 macrodomain Ter protein MatP -
  BH714_RS03760 (BH714_03760) ompA 817881..818936 (-) 1056 WP_020884794.1 porin OmpA -
  BH714_RS03765 (BH714_03765) sulA 819292..819801 (-) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  BH714_RS03770 (BH714_03770) sxy/tfoX 820019..820645 (+) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  BH714_RS03775 (BH714_03775) yccS 820602..822764 (-) 2163 WP_020884791.1 YccS family putative transporter -
  BH714_RS03780 (BH714_03780) - 822784..823230 (-) 447 WP_025204535.1 YccF domain-containing protein -
  BH714_RS03785 (BH714_03785) helD 823354..825408 (+) 2055 WP_040017075.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=197285 BH714_RS03770 WP_020884792.1 820019..820645(+) (sxy/tfoX) [Enterobacter ludwigii strain EN-119]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=197285 BH714_RS03770 WP_020884792.1 820019..820645(+) (sxy/tfoX) [Enterobacter ludwigii strain EN-119]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGACGGGGAGCTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCATCATTCTTAACCCTGATGAAACGGGGTCGCCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTAAAGATGCGGGCGAAAAAT
AAAGCGCTTAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAGGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577


Multiple sequence alignment