Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | BHU02_RS09215 | Genome accession | NZ_CP017271 |
| Coordinates | 1800957..1801646 (+) | Length | 229 a.a. |
| NCBI ID | WP_025015997.1 | Uniprot ID | A0AAF0KA01 |
| Organism | Latilactobacillus sakei subsp. sakei strain TMW 1.1189 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1795957..1806646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHU02_RS09195 (BHU02_09055) | - | 1796399..1796950 (+) | 552 | WP_025015996.1 | isochorismatase family cysteine hydrolase | - |
| BHU02_RS09200 (BHU02_09060) | fusA | 1797520..1799607 (-) | 2088 | WP_016265721.1 | elongation factor G | - |
| BHU02_RS09205 (BHU02_09065) | rpsG | 1799703..1800173 (-) | 471 | WP_004270185.1 | 30S ribosomal protein S7 | - |
| BHU02_RS09210 (BHU02_09070) | rpsL | 1800263..1800676 (-) | 414 | WP_004270179.1 | 30S ribosomal protein S12 | - |
| BHU02_RS09215 (BHU02_09075) | comC | 1800957..1801646 (+) | 690 | WP_025015997.1 | A24 family peptidase | Machinery gene |
| BHU02_RS09220 (BHU02_09080) | - | 1801650..1802222 (-) | 573 | WP_025015998.1 | isochorismatase family protein | - |
| BHU02_RS09225 (BHU02_09085) | rpoC | 1802396..1806040 (-) | 3645 | WP_251920205.1 | DNA-directed RNA polymerase subunit beta' | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 26178.49 Da Isoelectric Point: 7.2085
>NTDB_id=197169 BHU02_RS09215 WP_025015997.1 1800957..1801646(+) (comC) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGAIVFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLESVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGAIVFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLESVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ
Nucleotide
Download Length: 690 bp
>NTDB_id=197169 BHU02_RS09215 WP_025015997.1 1800957..1801646(+) (comC) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTCTTTTATAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCATCGTCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGTGATGTCGAGTTACTCACTATCCTGACGCTCTGGGTGGGTCTTGAATCCGTTTTACGAATTCTCTTGGCGGCCTG
TCTAATCTGTATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTGATACTACTCCTACAAACACCACAATAA
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTCTTTTATAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCATCGTCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGTGATGTCGAGTTACTCACTATCCTGACGCTCTGGGTGGGTCTTGAATCCGTTTTACGAATTCTCTTGGCGGCCTG
TCTAATCTGTATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTGATACTACTCCTACAAACACCACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Latilactobacillus sakei subsp. sakei 23K |
98.69 |
100 |
0.987 |