Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   BB313_RS06260 Genome accession   NZ_CP021865
Coordinates   1184422..1184904 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain SG-M50     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1179422..1189904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB313_RS06240 (BB313_06220) alsS 1179681..1181363 (-) 1683 WP_000140346.1 acetolactate synthase AlsS -
  BB313_RS06245 (BB313_06225) - 1181473..1182699 (-) 1227 WP_000934876.1 tetratricopeptide repeat protein -
  BB313_RS06250 (BB313_06230) - 1182689..1183879 (-) 1191 WP_001081540.1 AI-2E family transporter -
  BB313_RS06255 (BB313_06235) - 1183971..1184432 (-) 462 WP_000796045.1 NUDIX hydrolase -
  BB313_RS06260 (BB313_06240) mutX 1184422..1184904 (-) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  BB313_RS06265 (BB313_06245) prx 1185112..1185294 (-) 183 WP_017647839.1 hypothetical protein Regulator
  BB313_RS06270 (BB313_06250) - 1185417..1185626 (-) 210 WP_000424774.1 helix-turn-helix domain-containing protein -
  BB313_RS11320 - 1185776..1185922 (+) 147 WP_001030869.1 hypothetical protein -
  BB313_RS06275 (BB313_06255) - 1186063..1186314 (+) 252 WP_000455662.1 hypothetical protein -
  BB313_RS06280 (BB313_06260) - 1186458..1187792 (-) 1335 WP_017647840.1 GH25 family lysozyme -
  BB313_RS06285 (BB313_06265) - 1187918..1188145 (-) 228 WP_000609111.1 phage holin -
  BB313_RS06290 (BB313_06270) - 1188138..1188440 (-) 303 WP_017647841.1 hypothetical protein -
  BB313_RS11545 - 1188449..1188577 (-) 129 WP_017647842.1 hypothetical protein -
  BB313_RS06295 (BB313_06275) - 1188600..1188992 (-) 393 WP_000889196.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=197124 BB313_RS06260 WP_000163512.1 1184422..1184904(-) (mutX) [Streptococcus agalactiae strain SG-M50]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=197124 BB313_RS06260 WP_000163512.1 1184422..1184904(-) (mutX) [Streptococcus agalactiae strain SG-M50]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712