Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BB161_RS07315 Genome accession   NZ_CP021862
Coordinates   1405836..1406276 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain CUGBS591     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400836..1411276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB161_RS07300 (BB161_07285) - 1401494..1402120 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  BB161_RS07305 (BB161_07290) rcrQ 1402228..1403982 (-) 1755 WP_000851084.1 ABC transporter ATP-binding protein Regulator
  BB161_RS07310 (BB161_07295) rcrP 1403972..1405789 (-) 1818 WP_088186182.1 ABC transporter ATP-binding protein Regulator
  BB161_RS07315 (BB161_07300) rcrR 1405836..1406276 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BB161_RS07320 (BB161_07305) - 1406545..1408617 (+) 2073 WP_000726930.1 surface-anchored 5'-nucleotidase -
  BB161_RS07325 (BB161_07310) - 1408654..1409064 (-) 411 WP_000594935.1 peptide deformylase -
  BB161_RS07330 (BB161_07315) gdhA 1409134..1410483 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -
  BB161_RS07335 (BB161_07320) - 1410651..1411160 (+) 510 WP_000870956.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=196805 BB161_RS07315 WP_000431168.1 1405836..1406276(-) (rcrR) [Streptococcus agalactiae strain CUGBS591]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=196805 BB161_RS07315 WP_000431168.1 1405836..1406276(-) (rcrR) [Streptococcus agalactiae strain CUGBS591]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411