Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   FORC48_RS20725 Genome accession   NZ_CP017234
Coordinates   3972595..3973029 (-) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus strain FORC_048     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3967595..3978029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC48_RS20710 (FORC48_4019) - 3968771..3969328 (+) 558 WP_000062062.1 PadR family transcriptional regulator -
  FORC48_RS20715 (FORC48_4020) metE 3969842..3972130 (+) 2289 WP_001007610.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  FORC48_RS20720 (FORC48_4021) comJ 3972169..3972558 (-) 390 WP_000424030.1 competence protein ComJ -
  FORC48_RS20725 (FORC48_4022) nucA/comI 3972595..3973029 (-) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  FORC48_RS20735 (FORC48_4023) - 3973256..3974005 (+) 750 WP_000388471.1 DUF3967 domain-containing protein -
  FORC48_RS20740 (FORC48_4024) kinB 3974044..3975318 (-) 1275 WP_025709085.1 sporulation sensor histidine kinase KinB -
  FORC48_RS20745 (FORC48_4026) - 3975629..3975829 (+) 201 WP_000929280.1 hypothetical protein -
  FORC48_RS20750 (FORC48_4027) - 3975952..3977115 (+) 1164 WP_000434577.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=196738 FORC48_RS20725 WP_000811494.1 3972595..3973029(-) (nucA/comI) [Bacillus cereus strain FORC_048]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=196738 FORC48_RS20725 WP_000811494.1 3972595..3973029(-) (nucA/comI) [Bacillus cereus strain FORC_048]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGTGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment