Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FORC46_RS05305 | Genome accession | NZ_CP017229 |
| Coordinates | 1017279..1017581 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain FORC_046 isolate Not reported | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1012279..1022581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC46_RS05280 (FORC46_1032) | rpsR | 1012641..1012901 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FORC46_RS05285 (FORC46_1033) | lon | 1012962..1015337 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| FORC46_RS05290 (FORC46_1034) | - | 1015354..1016001 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| FORC46_RS05295 (FORC46_1035) | fliW | 1016162..1016551 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FORC46_RS05300 (FORC46_1036) | proC | 1016551..1017282 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FORC46_RS05305 (FORC46_1037) | ctsT | 1017279..1017581 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| FORC46_RS05310 (FORC46_1038) | - | 1017578..1018240 (+) | 663 | WP_002856624.1 | hypothetical protein | - |
| FORC46_RS05315 (FORC46_1039) | - | 1018237..1018689 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| FORC46_RS05320 (FORC46_1040) | hemD | 1018686..1019315 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| FORC46_RS05325 (FORC46_1041) | thiE | 1019293..1019925 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| FORC46_RS05330 (FORC46_1042) | thiD | 1019915..1020727 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FORC46_RS05335 (FORC46_1043) | - | 1020724..1021410 (-) | 687 | WP_002856040.1 | endonuclease III domain-containing protein | - |
| FORC46_RS05340 (FORC46_1044) | - | 1021407..1022168 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=196670 FORC46_RS05305 WP_002855822.1 1017279..1017581(+) (ctsT) [Campylobacter jejuni strain FORC_046 isolate Not reported]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=196670 FORC46_RS05305 WP_002855822.1 1017279..1017581(+) (ctsT) [Campylobacter jejuni strain FORC_046 isolate Not reported]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |