Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   FORC46_RS03320 Genome accession   NZ_CP017229
Coordinates   632315..632752 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain FORC_046 isolate Not reported     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 627315..637752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC46_RS03300 (FORC46_0646) kdpD 627803..629734 (+) 1932 WP_088868024.1 sensor histidine kinase -
  FORC46_RS03305 (FORC46_0647) uvrB 629729..631702 (-) 1974 WP_002856888.1 excinuclease ABC subunit UvrB -
  FORC46_RS03310 (FORC46_0648) - 631856..632086 (+) 231 WP_002852327.1 hypothetical protein -
  FORC46_RS03315 (FORC46_0649) - 632076..632318 (+) 243 WP_002854947.1 hypothetical protein -
  FORC46_RS03320 (FORC46_0650) Cj0683 632315..632752 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FORC46_RS03325 (FORC46_0651) priA 632734..634587 (+) 1854 WP_002856756.1 primosomal protein N' -
  FORC46_RS03330 cipA 634597..635990 (-) 1394 Protein_638 DUF2972 domain-containing protein -
  FORC46_RS03335 (FORC46_0654) ispG 636136..637209 (+) 1074 WP_002857157.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=196667 FORC46_RS03320 WP_002852324.1 632315..632752(+) (Cj0683) [Campylobacter jejuni strain FORC_046 isolate Not reported]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=196667 FORC46_RS03320 WP_002852324.1 632315..632752(+) (Cj0683) [Campylobacter jejuni strain FORC_046 isolate Not reported]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment