Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   BHS01_RS10280 Genome accession   NZ_CP017195
Coordinates   2108290..2109342 (-) Length   350 a.a.
NCBI ID   WP_109835163.1    Uniprot ID   A0A7L4WHR1
Organism   Lactococcus paracarnosus strain TMW 2.1615     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2103290..2114342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BHS01_RS10260 (BHS01_10260) - 2103657..2104196 (-) 540 WP_109835159.1 cysteine hydrolase family protein -
  BHS01_RS10265 (BHS01_10265) - 2104305..2104709 (+) 405 WP_223271014.1 Lrp/AsnC family transcriptional regulator -
  BHS01_RS10270 (BHS01_10270) - 2104716..2105234 (-) 519 WP_109835161.1 NUDIX hydrolase -
  BHS01_RS10275 (BHS01_10275) adhE 2105432..2108032 (-) 2601 WP_109835162.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -
  BHS01_RS10280 (BHS01_10280) sepM 2108290..2109342 (-) 1053 WP_109835163.1 SepM family pheromone-processing serine protease Regulator
  BHS01_RS10285 (BHS01_10285) coaD 2109329..2109817 (-) 489 WP_109835164.1 pantetheine-phosphate adenylyltransferase -
  BHS01_RS10290 (BHS01_10290) rsmD 2109810..2110361 (-) 552 WP_109835165.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -

Sequence

Protein


Download         Length: 350 a.a.        Molecular weight: 37820.93 Da        Isoelectric Point: 9.8620

>NTDB_id=196592 BHS01_RS10280 WP_109835163.1 2108290..2109342(-) (sepM) [Lactococcus paracarnosus strain TMW 2.1615]
MKKYKQSFIKKRWLVILFLTILIIIGILFPLPYYIEMPGTTENVGSMVKVDQASVVGKGSLNLTTVSMMQATGAGLIYAA
ATDFTDVYSKKDMMGNQSDSDYNRMNAFYMESAQNAAIYEAFKLANKPFDLTYKGVYVLDVLKSSSLKNVLQVADTVSGV
DGKNFKSSQELMAYIKSLKVGAPISVQYINEEGKNKSADGKTIKLADGKAGIGITLVDHTVVSSTPAVKINAGGIGGPSA
GMMFTLEIYSQLTGKDLTQGKDIAGTGTIEANGIVGRIGGIDKKVATANQNGAKVFLAPDDEITPAMKKYDKHIKTNYQE
ALVAAKKLKTKMKIVPIKTVQDAINYLEKN

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=196592 BHS01_RS10280 WP_109835163.1 2108290..2109342(-) (sepM) [Lactococcus paracarnosus strain TMW 2.1615]
TTGAAGAAATATAAACAGTCTTTTATCAAAAAAAGATGGTTAGTTATCCTTTTTTTAACGATCTTGATAATCATTGGTAT
CTTATTCCCATTACCTTATTATATTGAAATGCCAGGAACTACTGAAAATGTCGGCTCTATGGTTAAGGTTGATCAGGCTT
CTGTTGTTGGCAAAGGGTCGCTAAATCTGACAACAGTATCTATGATGCAGGCAACAGGAGCAGGTTTGATCTACGCTGCT
GCAACTGATTTCACAGATGTTTACAGTAAGAAGGACATGATGGGTAATCAATCTGATAGTGATTATAATCGGATGAATGC
TTTTTATATGGAAAGTGCACAAAATGCTGCTATTTATGAAGCTTTCAAATTGGCTAATAAACCTTTTGACTTAACTTATA
AAGGGGTTTACGTTTTAGATGTGTTGAAATCTTCTTCTTTAAAAAATGTACTACAGGTAGCTGATACAGTTAGTGGTGTT
GATGGAAAAAATTTCAAATCTTCTCAAGAGTTAATGGCATATATCAAGTCTTTAAAAGTTGGTGCACCTATCTCTGTTCA
ATATATCAATGAAGAGGGAAAAAATAAATCAGCTGATGGTAAGACGATTAAATTAGCAGATGGTAAAGCAGGTATTGGGA
TTACATTAGTTGATCATACAGTTGTTTCTAGTACGCCCGCTGTTAAGATAAATGCTGGTGGGATAGGCGGACCATCTGCT
GGGATGATGTTTACACTTGAAATCTATTCTCAGTTAACGGGTAAGGATTTGACTCAAGGTAAGGACATAGCTGGTACAGG
TACTATCGAAGCAAACGGGATCGTAGGCCGTATTGGTGGTATCGATAAAAAAGTGGCGACTGCTAATCAAAATGGTGCGA
AGGTCTTTTTAGCTCCAGATGATGAAATTACGCCGGCAATGAAAAAATATGATAAGCATATCAAAACAAATTACCAAGAA
GCACTGGTTGCTGCAAAAAAATTGAAAACTAAAATGAAGATTGTGCCAATTAAGACAGTGCAAGACGCAATTAATTACTT
GGAAAAAAATTAA

Domains

Predicted by InterproScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(236-319)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L4WHR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

51.176

97.143

0.497

Multiple sequence alignment