Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BHS01_RS02575 | Genome accession | NZ_CP017195 |
| Coordinates | 495920..498361 (+) | Length | 813 a.a. |
| NCBI ID | WP_109835009.1 | Uniprot ID | A0A7L4WDG7 |
| Organism | Lactococcus paracarnosus strain TMW 2.1615 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 490920..503361
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHS01_RS02550 (BHS01_02535) | - | 491524..492036 (+) | 513 | WP_109835014.1 | adenine phosphoribosyltransferase | - |
| BHS01_RS02555 (BHS01_02540) | rpoE | 492140..492691 (+) | 552 | WP_109835013.1 | DNA-directed RNA polymerase subunit delta | - |
| BHS01_RS02560 (BHS01_02545) | mltG | 492856..494445 (+) | 1590 | WP_109835012.1 | endolytic transglycosylase MltG | - |
| BHS01_RS02565 (BHS01_02550) | greA | 494573..495055 (+) | 483 | WP_109835011.1 | transcription elongation factor GreA | - |
| BHS01_RS02570 (BHS01_02555) | - | 495368..495808 (+) | 441 | WP_109835010.1 | CtsR family transcriptional regulator | - |
| BHS01_RS02575 (BHS01_02560) | clpC | 495920..498361 (+) | 2442 | WP_109835009.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| BHS01_RS02580 (BHS01_02565) | hpf | 498443..498994 (+) | 552 | WP_109835008.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| BHS01_RS02585 (BHS01_02570) | eno | 499205..500530 (+) | 1326 | WP_079507030.1 | phosphopyruvate hydratase | - |
| BHS01_RS02590 (BHS01_02575) | - | 500669..501631 (-) | 963 | WP_109835007.1 | asparaginase | - |
| BHS01_RS11490 | - | 501836..502159 (+) | 324 | Protein_511 | alcohol dehydrogenase catalytic domain-containing protein | - |
| BHS01_RS11380 | - | 502193..502354 (+) | 162 | WP_233220373.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 89878.08 Da Isoelectric Point: 6.6427
>NTDB_id=196565 BHS01_RS02575 WP_109835009.1 495920..498361(+) (clpC) [Lactococcus paracarnosus strain TMW 2.1615]
MTQTYTRILQEILKTARIFAAGNGADYAETQHVLAGMLSVNDSFSQNILTDHDVTIDMALAEIENHQLPEKTLQVSHIKF
SPKVERLLSESDAFAMQNHLSETGSEHLLYVLLTDDDNVAKKLLELNKIKITDIVKDLVELGNLTVKKSTRKAVTPMGKR
DAASDVSPSSLTPTLDSVARDVTEDARQGLIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVDG
NIPISLQGSRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFKLIGATTFNEYQKYIEKDAALERRFAKVTVEEPTANETVAILQGLKATFESFHQVSFDEEAIKSAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKITAKNNLLEQSQLEKQIMSLETQLQEAVINKTFKEAKALNISLEKQIKKREKTISKKHISRVKE
TDVFSVVSNLTGVPVTQMSKSEMKRLVNLEKELHKRVIGQSEAVSAVANAIRRSRSGISDDKRPMGSFMFLGPTGVGKTE
LAKALAKTVFGDESSMIRIDMSEYMEKFNTSRLVGAPPGYVGYEEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATALRDEKTVGFGTTNQSADYAAMKARILEELKKQYRPEFLNRIDESIVFHP
LAEKELSDIVKIMVQPLVDRLANRQINLKLSANAYQLIAKHGFDPEYGARPIRKALEKELENQLSDKLLVGDIVAGSLVT
VGTMSDKLTIKIK
MTQTYTRILQEILKTARIFAAGNGADYAETQHVLAGMLSVNDSFSQNILTDHDVTIDMALAEIENHQLPEKTLQVSHIKF
SPKVERLLSESDAFAMQNHLSETGSEHLLYVLLTDDDNVAKKLLELNKIKITDIVKDLVELGNLTVKKSTRKAVTPMGKR
DAASDVSPSSLTPTLDSVARDVTEDARQGLIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVDG
NIPISLQGSRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFKLIGATTFNEYQKYIEKDAALERRFAKVTVEEPTANETVAILQGLKATFESFHQVSFDEEAIKSAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKITAKNNLLEQSQLEKQIMSLETQLQEAVINKTFKEAKALNISLEKQIKKREKTISKKHISRVKE
TDVFSVVSNLTGVPVTQMSKSEMKRLVNLEKELHKRVIGQSEAVSAVANAIRRSRSGISDDKRPMGSFMFLGPTGVGKTE
LAKALAKTVFGDESSMIRIDMSEYMEKFNTSRLVGAPPGYVGYEEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATALRDEKTVGFGTTNQSADYAAMKARILEELKKQYRPEFLNRIDESIVFHP
LAEKELSDIVKIMVQPLVDRLANRQINLKLSANAYQLIAKHGFDPEYGARPIRKALEKELENQLSDKLLVGDIVAGSLVT
VGTMSDKLTIKIK
Nucleotide
Download Length: 2442 bp
>NTDB_id=196565 BHS01_RS02575 WP_109835009.1 495920..498361(+) (clpC) [Lactococcus paracarnosus strain TMW 2.1615]
ATGACACAAACATATACACGTATACTTCAAGAAATATTGAAAACAGCTCGGATTTTTGCAGCTGGAAATGGCGCAGATTA
TGCAGAAACACAACATGTTTTAGCGGGTATGTTATCTGTAAACGATAGTTTTAGCCAAAATATTTTAACTGATCATGATG
TGACGATTGACATGGCTTTGGCAGAAATCGAGAATCATCAGTTACCAGAAAAAACGCTGCAGGTATCTCATATCAAATTT
TCACCCAAAGTCGAACGGTTATTATCAGAGTCTGATGCCTTTGCCATGCAAAATCACTTATCAGAGACTGGTTCTGAGCA
CTTGCTATATGTCCTGCTAACAGATGATGACAATGTTGCTAAGAAACTATTAGAGTTGAATAAAATCAAGATTACTGACA
TTGTCAAAGATCTAGTTGAATTGGGTAATCTGACTGTCAAAAAATCCACTAGAAAAGCTGTAACACCGATGGGGAAACGA
GATGCGGCGTCGGATGTTTCTCCATCTAGCTTAACACCAACGCTTGACTCTGTAGCGCGTGACGTCACAGAGGATGCAAG
GCAAGGTCTCATCGACCCTATGATTGGGAGAGATAAAGAAATTGAACGCGTCATTCATATTTTAAGTCGTCGTACCAAAA
ATAATCCTGTACTCGTTGGTGAGCCAGGTGTTGGTAAATCAGCAATTATTGAAGGACTTGCACAACGTATCGTAGACGGA
AATATTCCGATTAGCCTGCAAGGCAGCCGCTTGATGTCGTTGAATATTGCTAATGTGGTTGCAGGAACTAAATTTCGAGG
CGAATTTGAGGACCGTATGACGGCTATCGTAGACGAAGTCAGCCAAGATGCGAATACGATTGTCTTTGTGGACGAATTAC
ATACGATTGTTGGTGCTGGCGGAGGAACTGACTCTGTTACAGATGCCTCTAATATCATGAAACCAGCACTGGCTCGAGGC
GAGTTTAAGTTGATTGGTGCAACAACTTTTAATGAGTATCAAAAGTATATCGAAAAAGATGCAGCCTTAGAACGTCGGTT
TGCTAAAGTAACGGTTGAGGAACCAACTGCAAATGAAACTGTTGCCATTTTACAGGGCTTAAAGGCGACCTTCGAAAGTT
TTCATCAGGTTAGTTTTGACGAAGAAGCGATTAAATCTGCTGTTCAGCTCAGTGTTCGCTACATGCCAAGTCGCAGATTA
CCTGATAAGGCGATAGACTTACTAGATGAAGCAGCAGCAGCTGTCAAAATAACAGCCAAAAATAATTTACTAGAACAAAG
TCAACTTGAAAAGCAAATTATGTCCTTAGAAACGCAACTCCAAGAAGCAGTTATAAATAAGACGTTTAAGGAAGCAAAGG
CTTTAAATATCTCACTTGAGAAACAGATTAAGAAACGCGAAAAAACAATCAGTAAAAAGCATATCAGTCGGGTAAAAGAA
ACGGATGTATTTTCTGTTGTCTCTAATTTAACTGGTGTACCAGTTACACAAATGAGTAAAAGCGAGATGAAACGCCTAGT
TAATTTGGAAAAAGAGTTACACAAGCGTGTTATTGGGCAAAGTGAAGCAGTTAGCGCAGTAGCAAACGCGATTCGCAGAA
GCCGTTCGGGTATCTCTGATGATAAACGGCCGATGGGATCCTTCATGTTTTTAGGTCCAACAGGTGTTGGTAAAACAGAA
CTTGCTAAAGCACTGGCAAAAACTGTATTTGGCGATGAATCCAGTATGATCCGGATTGACATGAGCGAGTACATGGAGAA
ATTTAATACGAGCCGTTTAGTCGGTGCGCCTCCAGGTTACGTAGGCTATGAAGAAGGCGGACAGCTGACAGAACAAGTAC
GCAATAAACCTTATGCAGTCGTCCTTTTTGATGAGGCGGAAAAAGCACATCCAGATGTCTTTAACTTACTGTTACAAATT
CTCGATGATGGGTTTATTACAGATGGAAAAGGCCGCAAAGTTGATTTTCGAAATACAATCATTATCATGACCAGTAATTT
GGGCGCAACAGCCTTACGTGATGAAAAGACGGTCGGCTTTGGTACGACAAATCAATCAGCTGATTATGCAGCCATGAAAG
CTAGAATACTGGAAGAGCTGAAAAAACAATATCGACCTGAGTTTTTGAATCGGATAGATGAAAGTATCGTGTTTCATCCC
TTGGCTGAAAAGGAATTATCTGATATCGTCAAGATTATGGTACAGCCTTTAGTTGACAGATTAGCCAACAGACAGATCAA
CTTGAAATTATCAGCAAATGCTTACCAGCTAATTGCTAAACATGGCTTTGATCCTGAATACGGTGCAAGACCAATTAGAA
AAGCCTTAGAAAAAGAACTTGAAAACCAACTTTCAGATAAGCTATTGGTAGGTGATATTGTAGCGGGTAGCCTAGTAACA
GTGGGTACTATGAGTGATAAGCTAACAATCAAGATAAAATGA
ATGACACAAACATATACACGTATACTTCAAGAAATATTGAAAACAGCTCGGATTTTTGCAGCTGGAAATGGCGCAGATTA
TGCAGAAACACAACATGTTTTAGCGGGTATGTTATCTGTAAACGATAGTTTTAGCCAAAATATTTTAACTGATCATGATG
TGACGATTGACATGGCTTTGGCAGAAATCGAGAATCATCAGTTACCAGAAAAAACGCTGCAGGTATCTCATATCAAATTT
TCACCCAAAGTCGAACGGTTATTATCAGAGTCTGATGCCTTTGCCATGCAAAATCACTTATCAGAGACTGGTTCTGAGCA
CTTGCTATATGTCCTGCTAACAGATGATGACAATGTTGCTAAGAAACTATTAGAGTTGAATAAAATCAAGATTACTGACA
TTGTCAAAGATCTAGTTGAATTGGGTAATCTGACTGTCAAAAAATCCACTAGAAAAGCTGTAACACCGATGGGGAAACGA
GATGCGGCGTCGGATGTTTCTCCATCTAGCTTAACACCAACGCTTGACTCTGTAGCGCGTGACGTCACAGAGGATGCAAG
GCAAGGTCTCATCGACCCTATGATTGGGAGAGATAAAGAAATTGAACGCGTCATTCATATTTTAAGTCGTCGTACCAAAA
ATAATCCTGTACTCGTTGGTGAGCCAGGTGTTGGTAAATCAGCAATTATTGAAGGACTTGCACAACGTATCGTAGACGGA
AATATTCCGATTAGCCTGCAAGGCAGCCGCTTGATGTCGTTGAATATTGCTAATGTGGTTGCAGGAACTAAATTTCGAGG
CGAATTTGAGGACCGTATGACGGCTATCGTAGACGAAGTCAGCCAAGATGCGAATACGATTGTCTTTGTGGACGAATTAC
ATACGATTGTTGGTGCTGGCGGAGGAACTGACTCTGTTACAGATGCCTCTAATATCATGAAACCAGCACTGGCTCGAGGC
GAGTTTAAGTTGATTGGTGCAACAACTTTTAATGAGTATCAAAAGTATATCGAAAAAGATGCAGCCTTAGAACGTCGGTT
TGCTAAAGTAACGGTTGAGGAACCAACTGCAAATGAAACTGTTGCCATTTTACAGGGCTTAAAGGCGACCTTCGAAAGTT
TTCATCAGGTTAGTTTTGACGAAGAAGCGATTAAATCTGCTGTTCAGCTCAGTGTTCGCTACATGCCAAGTCGCAGATTA
CCTGATAAGGCGATAGACTTACTAGATGAAGCAGCAGCAGCTGTCAAAATAACAGCCAAAAATAATTTACTAGAACAAAG
TCAACTTGAAAAGCAAATTATGTCCTTAGAAACGCAACTCCAAGAAGCAGTTATAAATAAGACGTTTAAGGAAGCAAAGG
CTTTAAATATCTCACTTGAGAAACAGATTAAGAAACGCGAAAAAACAATCAGTAAAAAGCATATCAGTCGGGTAAAAGAA
ACGGATGTATTTTCTGTTGTCTCTAATTTAACTGGTGTACCAGTTACACAAATGAGTAAAAGCGAGATGAAACGCCTAGT
TAATTTGGAAAAAGAGTTACACAAGCGTGTTATTGGGCAAAGTGAAGCAGTTAGCGCAGTAGCAAACGCGATTCGCAGAA
GCCGTTCGGGTATCTCTGATGATAAACGGCCGATGGGATCCTTCATGTTTTTAGGTCCAACAGGTGTTGGTAAAACAGAA
CTTGCTAAAGCACTGGCAAAAACTGTATTTGGCGATGAATCCAGTATGATCCGGATTGACATGAGCGAGTACATGGAGAA
ATTTAATACGAGCCGTTTAGTCGGTGCGCCTCCAGGTTACGTAGGCTATGAAGAAGGCGGACAGCTGACAGAACAAGTAC
GCAATAAACCTTATGCAGTCGTCCTTTTTGATGAGGCGGAAAAAGCACATCCAGATGTCTTTAACTTACTGTTACAAATT
CTCGATGATGGGTTTATTACAGATGGAAAAGGCCGCAAAGTTGATTTTCGAAATACAATCATTATCATGACCAGTAATTT
GGGCGCAACAGCCTTACGTGATGAAAAGACGGTCGGCTTTGGTACGACAAATCAATCAGCTGATTATGCAGCCATGAAAG
CTAGAATACTGGAAGAGCTGAAAAAACAATATCGACCTGAGTTTTTGAATCGGATAGATGAAAGTATCGTGTTTCATCCC
TTGGCTGAAAAGGAATTATCTGATATCGTCAAGATTATGGTACAGCCTTTAGTTGACAGATTAGCCAACAGACAGATCAA
CTTGAAATTATCAGCAAATGCTTACCAGCTAATTGCTAAACATGGCTTTGATCCTGAATACGGTGCAAGACCAATTAGAA
AAGCCTTAGAAAAAGAACTTGAAAACCAACTTTCAGATAAGCTATTGGTAGGTGATATTGTAGCGGGTAGCCTAGTAACA
GTGGGTACTATGAGTGATAAGCTAACAATCAAGATAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
61.262 |
99.385 |
0.609 |
| clpC | Streptococcus thermophilus LMG 18311 |
49.34 |
100 |
0.506 |
| clpC | Streptococcus thermophilus LMD-9 |
49.34 |
100 |
0.506 |
| clpC | Streptococcus pneumoniae Rx1 |
49.758 |
100 |
0.506 |
| clpC | Streptococcus pneumoniae D39 |
49.758 |
100 |
0.506 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.637 |
100 |
0.504 |
| clpC | Streptococcus mutans UA159 |
48.01 |
100 |
0.49 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.65 |
100 |
0.471 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.181 |
81.673 |
0.369 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.445 |
77.86 |
0.362 |
| clpE | Streptococcus pneumoniae Rx1 |
46.445 |
77.86 |
0.362 |
| clpE | Streptococcus pneumoniae D39 |
46.445 |
77.86 |
0.362 |
| clpE | Streptococcus pneumoniae R6 |
46.445 |
77.86 |
0.362 |