Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BHS00_RS02430 | Genome accession | NZ_CP017194 |
| Coordinates | 485135..487576 (+) | Length | 813 a.a. |
| NCBI ID | WP_079507034.1 | Uniprot ID | - |
| Organism | Lactococcus carnosus strain TMW 2.1612 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 480135..492576
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHS00_RS02405 (BHS00_02395) | - | 480815..481327 (+) | 513 | WP_188347511.1 | adenine phosphoribosyltransferase | - |
| BHS00_RS02410 (BHS00_02400) | rpoE | 481432..481974 (+) | 543 | WP_079507038.1 | DNA-directed RNA polymerase subunit delta | - |
| BHS00_RS02415 (BHS00_02405) | mltG | 482126..483691 (+) | 1566 | WP_079507036.1 | endolytic transglycosylase MltG | - |
| BHS00_RS02420 (BHS00_02410) | greA | 483811..484293 (+) | 483 | WP_047915986.1 | transcription elongation factor GreA | - |
| BHS00_RS02425 (BHS00_02415) | - | 484618..485058 (+) | 441 | WP_047915985.1 | CtsR family transcriptional regulator | - |
| BHS00_RS02430 (BHS00_02420) | clpC | 485135..487576 (+) | 2442 | WP_079507034.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| BHS00_RS02435 (BHS00_02425) | hpf | 487658..488209 (+) | 552 | WP_079507032.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| BHS00_RS02440 (BHS00_02430) | eno | 488420..489745 (+) | 1326 | WP_079507030.1 | phosphopyruvate hydratase | - |
| BHS00_RS02445 (BHS00_02435) | - | 489897..490859 (-) | 963 | WP_079507028.1 | asparaginase | - |
| BHS00_RS02450 (BHS00_02440) | - | 491015..491929 (+) | 915 | WP_079507026.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 89796.01 Da Isoelectric Point: 6.8479
>NTDB_id=196534 BHS00_RS02430 WP_079507034.1 485135..487576(+) (clpC) [Lactococcus carnosus strain TMW 2.1612]
MTQKQTPILQEILKTARIFAAGNGAEYAETQHVLAGMLSVNDSFSQNILTDHDVTIDMALAEIESQHLPEKTLQVSNIKF
SPKVVRLLSEADAFAQQNHLSETGSEHLLYILLTDDDNVAKKLLELNKIKTTEIVKDLVELGNLTVKKVTRKAVTPMGKR
DAASDVSASSLTPTLDSVARDVTDDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVDG
NIPISMQGFRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFKLIGATTFNEYQKYIEKDAALERRFAKVTVEEPTADETVAILQGLKATFEDFHQVSFEDDAIKTAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKIATKNNLLEQRALDKQLVSLEAQLQEAVINKAFKEAKALRVSLEKQVKRREKVISKKHISRVAE
TDVFAVVSNLTGVPVTQMSKSEMKRLVNLEKELHKRVIGQSEAVSAVANAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDETSMIRIDMSEYMEKFNTSRLVGAPPGYVGYEEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATALRDEKTVGFGTTNQSANYAAMKSRILEELKKQYRPEFLNRIDESIVFHP
LAEKELSDIVKIMVKPLVDRLANRQITLKLSATAYQLIAKHGFDPEYGARPIRKALEKDLENQLSDKLLLGEIATGSLVT
VGTRSDKLTIKVK
MTQKQTPILQEILKTARIFAAGNGAEYAETQHVLAGMLSVNDSFSQNILTDHDVTIDMALAEIESQHLPEKTLQVSNIKF
SPKVVRLLSEADAFAQQNHLSETGSEHLLYILLTDDDNVAKKLLELNKIKTTEIVKDLVELGNLTVKKVTRKAVTPMGKR
DAASDVSASSLTPTLDSVARDVTDDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVDG
NIPISMQGFRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFKLIGATTFNEYQKYIEKDAALERRFAKVTVEEPTADETVAILQGLKATFEDFHQVSFEDDAIKTAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKIATKNNLLEQRALDKQLVSLEAQLQEAVINKAFKEAKALRVSLEKQVKRREKVISKKHISRVAE
TDVFAVVSNLTGVPVTQMSKSEMKRLVNLEKELHKRVIGQSEAVSAVANAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDETSMIRIDMSEYMEKFNTSRLVGAPPGYVGYEEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATALRDEKTVGFGTTNQSANYAAMKSRILEELKKQYRPEFLNRIDESIVFHP
LAEKELSDIVKIMVKPLVDRLANRQITLKLSATAYQLIAKHGFDPEYGARPIRKALEKDLENQLSDKLLLGEIATGSLVT
VGTRSDKLTIKVK
Nucleotide
Download Length: 2442 bp
>NTDB_id=196534 BHS00_RS02430 WP_079507034.1 485135..487576(+) (clpC) [Lactococcus carnosus strain TMW 2.1612]
ATGACACAAAAACAGACACCTATACTTCAAGAAATTTTGAAAACAGCGCGTATTTTTGCAGCTGGAAATGGCGCAGAGTA
CGCAGAAACACAACATGTTTTAGCAGGTATGTTATCCGTCAATGATAGCTTTAGTCAAAATATTTTAACTGATCACGATG
TGACGATTGATATGGCATTGGCTGAAATTGAGAGCCAGCACTTACCCGAAAAAACACTGCAGGTGTCCAATATTAAATTT
TCACCTAAGGTCGTCCGCTTATTATCAGAAGCTGATGCCTTTGCTCAGCAAAATCACTTATCAGAAACAGGATCTGAACA
CCTGCTTTATATCTTGTTAACAGATGACGATAATGTCGCTAAGAAACTACTAGAATTGAATAAAATCAAGACGACTGAAA
TTGTTAAAGATTTAGTTGAATTGGGGAATCTTACTGTCAAAAAAGTGACTAGAAAAGCAGTTACACCGATGGGGAAACGC
GATGCTGCGTCTGATGTTTCCGCGTCTAGCTTGACACCAACACTTGACTCAGTAGCGCGTGACGTCACAGATGATGCAAG
GCAAGGTCGTATTGATCCTATGATTGGGCGAGATAAAGAGATTGAACGCGTCATCCATATTTTAAGTCGTCGTACCAAAA
ATAATCCTGTCCTCGTTGGTGAGCCAGGTGTTGGTAAATCTGCAATCATTGAAGGACTTGCACAACGGATCGTAGATGGC
AATATTCCGATTAGCATGCAAGGCTTTCGCTTGATGTCGCTAAACATTGCTAACGTGGTTGCAGGTACTAAATTCCGTGG
GGAATTTGAAGATCGTATGACAGCCATTGTAGATGAAGTCAGTCAAGATGCGAATACGATTGTTTTTGTTGACGAATTAC
ATACGATTGTTGGTGCTGGAGGCGGAACAGATTCTGTCACGGATGCCTCTAATATCATGAAACCAGCATTGGCTCGAGGC
GAGTTTAAATTGATTGGTGCAACAACTTTTAATGAGTATCAAAAGTATATCGAAAAAGATGCAGCCTTAGAACGTCGTTT
TGCAAAGGTAACTGTAGAGGAGCCTACAGCAGATGAAACCGTTGCGATTTTACAAGGGTTAAAGGCAACCTTTGAAGATT
TTCATCAGGTTAGTTTTGAGGATGATGCCATTAAAACAGCTGTTCAGCTAAGTGTTCGTTACATGCCTAGTCGCAGATTG
CCAGATAAGGCGATTGACTTACTAGATGAGGCAGCAGCAGCTGTCAAAATAGCGACTAAAAATAATTTGCTTGAACAACG
TGCACTTGACAAGCAACTTGTATCTTTAGAAGCACAACTCCAAGAAGCAGTCATAAATAAAGCGTTTAAAGAAGCAAAAG
CCTTGAGAGTCTCGCTTGAGAAACAGGTGAAGCGACGTGAAAAGGTAATCAGTAAAAAGCATATCAGTCGTGTAGCAGAA
ACAGATGTATTTGCTGTTGTCTCTAATTTAACTGGTGTGCCAGTTACACAAATGAGCAAAAGTGAGATGAAACGCCTAGT
TAATTTGGAAAAAGAGTTACACAAGCGTGTTATTGGGCAAAGTGAAGCAGTTAGTGCAGTAGCAAACGCAATTCGTAGAA
GCCGTTCGGGTATCTCTGATGATAGACGGCCAATGGGATCCTTCATGTTTTTAGGGCCAACAGGTGTTGGTAAAACAGAA
CTTGCCAAAGCATTGGCAGAAACTGTATTTGGCGACGAGACCAGTATGATCCGGATTGACATGAGCGAATACATGGAGAA
ATTTAATACGAGCCGATTAGTCGGTGCGCCTCCTGGTTACGTAGGCTATGAAGAAGGCGGACAACTGACAGAACAAGTTC
GCAATAAACCTTATGCGGTCGTCCTTTTTGATGAAGCAGAAAAAGCACATCCAGATGTCTTTAACTTACTCTTACAAATT
CTTGACGATGGGTTTATCACAGATGGTAAAGGTCGCAAAGTTGATTTTCGCAATACAATCATTATTATGACCAGCAATTT
GGGTGCAACAGCCTTACGTGATGAAAAAACAGTCGGCTTTGGTACGACTAACCAATCAGCCAATTATGCAGCCATGAAAT
CTAGAATACTTGAAGAGCTGAAGAAACAATATCGACCTGAATTTTTAAATCGGATAGATGAAAGTATTGTCTTTCATCCT
TTGGCTGAAAAAGAATTATCTGATATCGTCAAGATTATGGTAAAACCTTTAGTTGATAGATTAGCCAATAGACAGATCAC
TTTGAAGCTATCAGCAACAGCTTATCAGTTAATTGCTAAACATGGCTTTGATCCAGAATATGGTGCAAGACCAATTAGAA
AAGCTTTAGAAAAAGATCTTGAGAACCAACTTTCAGATAAGCTATTGCTAGGCGAGATTGCAACAGGAAGCCTTGTAACA
GTGGGGACTAGAAGTGATAAGCTAACGATTAAGGTAAAATGA
ATGACACAAAAACAGACACCTATACTTCAAGAAATTTTGAAAACAGCGCGTATTTTTGCAGCTGGAAATGGCGCAGAGTA
CGCAGAAACACAACATGTTTTAGCAGGTATGTTATCCGTCAATGATAGCTTTAGTCAAAATATTTTAACTGATCACGATG
TGACGATTGATATGGCATTGGCTGAAATTGAGAGCCAGCACTTACCCGAAAAAACACTGCAGGTGTCCAATATTAAATTT
TCACCTAAGGTCGTCCGCTTATTATCAGAAGCTGATGCCTTTGCTCAGCAAAATCACTTATCAGAAACAGGATCTGAACA
CCTGCTTTATATCTTGTTAACAGATGACGATAATGTCGCTAAGAAACTACTAGAATTGAATAAAATCAAGACGACTGAAA
TTGTTAAAGATTTAGTTGAATTGGGGAATCTTACTGTCAAAAAAGTGACTAGAAAAGCAGTTACACCGATGGGGAAACGC
GATGCTGCGTCTGATGTTTCCGCGTCTAGCTTGACACCAACACTTGACTCAGTAGCGCGTGACGTCACAGATGATGCAAG
GCAAGGTCGTATTGATCCTATGATTGGGCGAGATAAAGAGATTGAACGCGTCATCCATATTTTAAGTCGTCGTACCAAAA
ATAATCCTGTCCTCGTTGGTGAGCCAGGTGTTGGTAAATCTGCAATCATTGAAGGACTTGCACAACGGATCGTAGATGGC
AATATTCCGATTAGCATGCAAGGCTTTCGCTTGATGTCGCTAAACATTGCTAACGTGGTTGCAGGTACTAAATTCCGTGG
GGAATTTGAAGATCGTATGACAGCCATTGTAGATGAAGTCAGTCAAGATGCGAATACGATTGTTTTTGTTGACGAATTAC
ATACGATTGTTGGTGCTGGAGGCGGAACAGATTCTGTCACGGATGCCTCTAATATCATGAAACCAGCATTGGCTCGAGGC
GAGTTTAAATTGATTGGTGCAACAACTTTTAATGAGTATCAAAAGTATATCGAAAAAGATGCAGCCTTAGAACGTCGTTT
TGCAAAGGTAACTGTAGAGGAGCCTACAGCAGATGAAACCGTTGCGATTTTACAAGGGTTAAAGGCAACCTTTGAAGATT
TTCATCAGGTTAGTTTTGAGGATGATGCCATTAAAACAGCTGTTCAGCTAAGTGTTCGTTACATGCCTAGTCGCAGATTG
CCAGATAAGGCGATTGACTTACTAGATGAGGCAGCAGCAGCTGTCAAAATAGCGACTAAAAATAATTTGCTTGAACAACG
TGCACTTGACAAGCAACTTGTATCTTTAGAAGCACAACTCCAAGAAGCAGTCATAAATAAAGCGTTTAAAGAAGCAAAAG
CCTTGAGAGTCTCGCTTGAGAAACAGGTGAAGCGACGTGAAAAGGTAATCAGTAAAAAGCATATCAGTCGTGTAGCAGAA
ACAGATGTATTTGCTGTTGTCTCTAATTTAACTGGTGTGCCAGTTACACAAATGAGCAAAAGTGAGATGAAACGCCTAGT
TAATTTGGAAAAAGAGTTACACAAGCGTGTTATTGGGCAAAGTGAAGCAGTTAGTGCAGTAGCAAACGCAATTCGTAGAA
GCCGTTCGGGTATCTCTGATGATAGACGGCCAATGGGATCCTTCATGTTTTTAGGGCCAACAGGTGTTGGTAAAACAGAA
CTTGCCAAAGCATTGGCAGAAACTGTATTTGGCGACGAGACCAGTATGATCCGGATTGACATGAGCGAATACATGGAGAA
ATTTAATACGAGCCGATTAGTCGGTGCGCCTCCTGGTTACGTAGGCTATGAAGAAGGCGGACAACTGACAGAACAAGTTC
GCAATAAACCTTATGCGGTCGTCCTTTTTGATGAAGCAGAAAAAGCACATCCAGATGTCTTTAACTTACTCTTACAAATT
CTTGACGATGGGTTTATCACAGATGGTAAAGGTCGCAAAGTTGATTTTCGCAATACAATCATTATTATGACCAGCAATTT
GGGTGCAACAGCCTTACGTGATGAAAAAACAGTCGGCTTTGGTACGACTAACCAATCAGCCAATTATGCAGCCATGAAAT
CTAGAATACTTGAAGAGCTGAAGAAACAATATCGACCTGAATTTTTAAATCGGATAGATGAAAGTATTGTCTTTCATCCT
TTGGCTGAAAAAGAATTATCTGATATCGTCAAGATTATGGTAAAACCTTTAGTTGATAGATTAGCCAATAGACAGATCAC
TTTGAAGCTATCAGCAACAGCTTATCAGTTAATTGCTAAACATGGCTTTGATCCAGAATATGGTGCAAGACCAATTAGAA
AAGCTTTAGAAAAAGATCTTGAGAACCAACTTTCAGATAAGCTATTGCTAGGCGAGATTGCAACAGGAAGCCTTGTAACA
GTGGGGACTAGAAGTGATAAGCTAACGATTAAGGTAAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
61.159 |
99.754 |
0.61 |
| clpC | Streptococcus thermophilus LMD-9 |
49.396 |
100 |
0.503 |
| clpC | Streptococcus thermophilus LMG 18311 |
48.913 |
100 |
0.498 |
| clpC | Streptococcus pneumoniae Rx1 |
49.148 |
100 |
0.497 |
| clpC | Streptococcus pneumoniae D39 |
49.148 |
100 |
0.497 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.027 |
100 |
0.496 |
| clpC | Streptococcus mutans UA159 |
47.659 |
100 |
0.488 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.537 |
99.877 |
0.475 |
| clpE | Streptococcus mutans UA159 |
46.625 |
78.352 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.508 |
77.491 |
0.36 |
| clpE | Streptococcus pneumoniae Rx1 |
46.508 |
77.491 |
0.36 |
| clpE | Streptococcus pneumoniae D39 |
46.508 |
77.491 |
0.36 |
| clpE | Streptococcus pneumoniae R6 |
46.508 |
77.491 |
0.36 |