Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BFV65_RS07445 Genome accession   NZ_CP017186
Coordinates   1603052..1603678 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei subsp. hoffmannii strain DSM 14563     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1598052..1608678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFV65_RS07425 (BFV65_07425) - 1598451..1600211 (-) 1761 WP_069596416.1 AAA family ATPase -
  BFV65_RS07430 (BFV65_07430) matP 1600398..1600850 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  BFV65_RS07435 (BFV65_07435) ompA 1600916..1601968 (-) 1053 WP_017694761.1 porin OmpA -
  BFV65_RS07440 (BFV65_07440) sulA 1602325..1602834 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  BFV65_RS07445 (BFV65_07445) sxy/tfoX 1603052..1603678 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  BFV65_RS07450 (BFV65_07450) yccS 1603635..1605797 (-) 2163 WP_069596417.1 YccS family putative transporter -
  BFV65_RS07455 (BFV65_07455) - 1605816..1606262 (-) 447 WP_022647660.1 YccF domain-containing protein -
  BFV65_RS07460 (BFV65_07460) helD 1606385..1608439 (+) 2055 WP_069596418.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=196465 BFV65_RS07445 WP_023299743.1 1603052..1603678(+) (sxy/tfoX) [Enterobacter hormaechei subsp. hoffmannii strain DSM 14563]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=196465 BFV65_RS07445 WP_023299743.1 1603052..1603678(+) (sxy/tfoX) [Enterobacter hormaechei subsp. hoffmannii strain DSM 14563]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment