Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BFV67_RS07405 Genome accession   NZ_CP017184
Coordinates   1614829..1615455 (+) Length   208 a.a.
NCBI ID   WP_069598087.1    Uniprot ID   -
Organism   Enterobacter roggenkampii strain DSM 16690     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1609829..1620455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFV67_RS07385 (BFV67_07385) - 1610228..1611988 (-) 1761 WP_069598086.1 AAA family ATPase -
  BFV67_RS07390 (BFV67_07390) matP 1612175..1612627 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  BFV67_RS07395 (BFV67_07395) ompA 1612692..1613747 (-) 1056 WP_023292865.1 porin OmpA -
  BFV67_RS07400 (BFV67_07400) sulA 1614102..1614611 (-) 510 WP_023618859.1 SOS-induced cell division inhibitor SulA -
  BFV67_RS07405 (BFV67_07405) sxy/tfoX 1614829..1615455 (+) 627 WP_069598087.1 TfoX/Sxy family DNA transformation protein Regulator
  BFV67_RS07410 (BFV67_07410) yccS 1615412..1617574 (-) 2163 WP_032651202.1 YccS family putative transporter -
  BFV67_RS07415 (BFV67_07415) - 1617594..1618040 (-) 447 WP_008499924.1 YccF domain-containing protein -
  BFV67_RS07420 (BFV67_07420) helD 1618164..1620218 (+) 2055 WP_069598088.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23941.60 Da        Isoelectric Point: 9.7951

>NTDB_id=196443 BFV67_RS07405 WP_069598087.1 1614829..1615455(+) (sxy/tfoX) [Enterobacter roggenkampii strain DSM 16690]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYRRHQRTRLKDLPNLTFQLEVLLFEAGITNEETLRALGARVSWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=196443 BFV67_RS07405 WP_069598087.1 1614829..1615455(+) (sxy/tfoX) [Enterobacter roggenkampii strain DSM 16690]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGTTACACCCTGGCGGTCGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTACCTTCGCGCGTGTG
AAGAGAGTGCAAAATACTGTGTAAAAAATGCTTCCTCCTTCTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
GAAAGAGCGCTACCGGCGTCATCAACGAACCCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTTTTGCTCT
TTGAAGCCGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGCGCCAGAGTGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAGGCACTCAGTATAAAAGTGCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
CCGCCGGGAACTGACGGAGTGGTTTAATGCGCTGCCTGAGCCGCAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment