Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BFV64_RS07795 Genome accession   NZ_CP017181
Coordinates   1642936..1643565 (+) Length   209 a.a.
NCBI ID   WP_069601891.1    Uniprot ID   -
Organism   Enterobacter kobei strain DSM 13645     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1637936..1648565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFV64_RS07775 (BFV64_07775) - 1638337..1640097 (-) 1761 WP_069601890.1 AAA family ATPase -
  BFV64_RS07780 (BFV64_07780) matP 1640284..1640736 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  BFV64_RS07785 (BFV64_07785) ompA 1640801..1641856 (-) 1056 WP_014883252.1 porin OmpA -
  BFV64_RS07790 (BFV64_07790) sulA 1642212..1642721 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  BFV64_RS07795 (BFV64_07795) sxy/tfoX 1642936..1643565 (+) 630 WP_069601891.1 TfoX/Sxy family DNA transformation protein Regulator
  BFV64_RS07800 (BFV64_07800) yccS 1643522..1645684 (-) 2163 WP_023332614.1 YccS family putative transporter -
  BFV64_RS07805 (BFV64_07805) - 1645704..1646150 (-) 447 WP_014883256.1 YccF domain-containing protein -
  BFV64_RS07810 (BFV64_07810) helD 1646274..1648328 (+) 2055 WP_069601892.1 DNA helicase IV -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24031.63 Da        Isoelectric Point: 9.0691

>NTDB_id=196400 BFV64_RS07795 WP_069601891.1 1642936..1643565(+) (sxy/tfoX) [Enterobacter kobei strain DSM 13645]
MTKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLL
NYYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAK
NRALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 630 bp        

>NTDB_id=196400 BFV64_RS07795 WP_069601891.1 1642936..1643565(+) (sxy/tfoX) [Enterobacter kobei strain DSM 13645]
ATCACGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGC
ACTGTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCT
GTGAAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTAATGAAACGAGGCCGCCCGGTACTTCTC
AACTATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGC
GAGGAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTAC
TTTTTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAA
AATAGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGG
CACTCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(15-107)

TfoX C-terminal domain (TfoX_C)

(117-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

56.931

96.651

0.55

Multiple sequence alignment