Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CCZ24_RS05230 Genome accession   NZ_CP021773
Coordinates   1028753..1029421 (-) Length   222 a.a.
NCBI ID   WP_000076874.1    Uniprot ID   X5JZS1
Organism   Streptococcus agalactiae strain B105     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1023753..1034421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS05210 (CCZ24_05130) - 1023919..1024692 (+) 774 WP_000622399.1 DUF3307 domain-containing protein -
  CCZ24_RS05215 (CCZ24_05135) - 1024725..1026320 (-) 1596 WP_000093958.1 peptide ABC transporter substrate-binding protein -
  CCZ24_RS05220 (CCZ24_05140) xerS 1026705..1027775 (+) 1071 WP_000817931.1 tyrosine recombinase XerS Machinery gene
  CCZ24_RS05225 (CCZ24_05145) - 1027818..1028756 (-) 939 WP_000620981.1 sensor histidine kinase -
  CCZ24_RS05230 (CCZ24_05150) braR 1028753..1029421 (-) 669 WP_000076874.1 response regulator transcription factor Regulator
  CCZ24_RS05235 (CCZ24_05155) - 1029531..1031486 (-) 1956 WP_000499553.1 FtsX-like permease family protein -
  CCZ24_RS05240 (CCZ24_05160) - 1031488..1032240 (-) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  CCZ24_RS05245 (CCZ24_05165) - 1032266..1033228 (-) 963 WP_001253125.1 S41 family peptidase -
  CCZ24_RS05250 (CCZ24_05170) - 1033394..1033881 (+) 488 Protein_992 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25403.45 Da        Isoelectric Point: 5.0693

>NTDB_id=196213 CCZ24_RS05230 WP_000076874.1 1028753..1029421(-) (braR) [Streptococcus agalactiae strain B105]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=196213 CCZ24_RS05230 WP_000076874.1 1028753..1029421(-) (braR) [Streptococcus agalactiae strain B105]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(8-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5DCL
  PDB 5DCM

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464