Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   CCZ24_RS03960 Genome accession   NZ_CP021773
Coordinates   775532..776014 (+) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain B105     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 770532..781014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS03950 (CCZ24_03890) rfbB 770999..772045 (+) 1047 WP_000134275.1 dTDP-glucose 4,6-dehydratase -
  CCZ24_RS03955 (CCZ24_03895) hylB 772097..775315 (-) 3219 WP_000403410.1 hyaluronate lyase -
  CCZ24_RS03960 (CCZ24_03900) mutX 775532..776014 (+) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  CCZ24_RS03965 (CCZ24_03905) - 776004..776465 (+) 462 WP_000796047.1 NUDIX hydrolase -
  CCZ24_RS03970 (CCZ24_03910) - 776557..777747 (+) 1191 WP_001075588.1 AI-2E family transporter -
  CCZ24_RS03975 (CCZ24_03915) - 777737..778963 (+) 1227 WP_000934868.1 hypothetical protein -
  CCZ24_RS03980 (CCZ24_03920) alsS 779073..780755 (+) 1683 WP_000140341.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=196205 CCZ24_RS03960 WP_000163512.1 775532..776014(+) (mutX) [Streptococcus agalactiae strain B105]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=196205 CCZ24_RS03960 WP_000163512.1 775532..776014(+) (mutX) [Streptococcus agalactiae strain B105]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCATCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712