Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CCZ24_RS03640 Genome accession   NZ_CP021773
Coordinates   702320..704059 (+) Length   579 a.a.
NCBI ID   WP_071659984.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 697320..709059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS03610 (CCZ24_03555) - 697576..697911 (-) 336 WP_071659982.1 imsC-like protein -
  CCZ24_RS03615 (CCZ24_03560) - 697908..698153 (-) 246 WP_001813542.1 hypothetical protein -
  CCZ24_RS03625 (CCZ24_03570) - 699118..699588 (+) 471 WP_000142891.1 MarR family winged helix-turn-helix transcriptional regulator -
  CCZ24_RS03630 (CCZ24_03575) - 699572..700597 (+) 1026 WP_000845068.1 aminoglycoside phosphotransferase family protein -
  CCZ24_RS03635 (CCZ24_03580) rcrP 700594..702339 (+) 1746 WP_071659983.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03640 (CCZ24_03585) rcrQ 702320..704059 (+) 1740 WP_071659984.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03645 (CCZ24_03590) - 704171..704437 (-) 267 Protein_683 transposase -
  CCZ24_RS03650 (CCZ24_03595) - 704456..704950 (+) 495 WP_000482660.1 LPXTG cell wall anchor domain-containing protein -
  CCZ24_RS12030 - 705206..705469 (-) 264 Protein_685 DUF5960 family protein -
  CCZ24_RS11895 (CCZ24_03600) - 705825..706075 (-) 251 Protein_686 hypothetical protein -
  CCZ24_RS12035 (CCZ24_03605) - 706122..706921 (+) 800 Protein_687 IS30 family transposase -
  CCZ24_RS03665 (CCZ24_03610) - 707032..707250 (+) 219 WP_000278092.1 helix-turn-helix transcriptional regulator -
  CCZ24_RS03670 (CCZ24_03615) - 707521..707769 (+) 249 WP_002921272.1 DUF3173 family protein -
  CCZ24_RS03675 (CCZ24_03620) - 707772..708977 (+) 1206 WP_000201883.1 site-specific integrase -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64166.53 Da        Isoelectric Point: 5.5046

>NTDB_id=196202 CCZ24_RS03640 WP_071659984.1 702320..704059(+) (rcrQ) [Streptococcus agalactiae strain B105]
MNLTMLKRLYTYIKPNRLGFFTALFLVAAGTGLTVLAPSYTGQITTQLYNGISQGSFDWKAIFQLSVIVAGLYLVGQSLV
FLASFTLAKVIAKSVERLRNEVSSKIHRLPINYYDTRGNGEILSVITNDIDILNNFLSQNLQEIIVQTVTIVGIFSIMLS
INGWLTLVAVIMVPISLLTAASSASFGQKMYEKQQNLIGQVNGYIEEIYNGHNVVQAFNYQDRAKAKFDSLNKELQSTAE
KAETYASYVMPLIKIVNNAGYVISAVWGSFMALQGTMTVGNVQAMLQYTQQFNEPFSSIAGMVGAYSSAMAGSQRIFELL
DETEEVADQATSQDLSKQAGRVEFKHVKFGYTPDNLLMQDVNVTVEPGQKVAIVGPTGAGKTTLINLLMRFYEINDGQIL
VDGVDTRQMSREQLRSQFGMVLQDTWFFEGSIMENLQYGRENISHDQAISAAKMASAHSFIKTQPGSYDMVLENNGENIS
QGERQLLTIARAIAANPKMLILDEATSNVDTYTEQLIQKAMAKLMEGRTSFVIAHRLSTIKDAHVILYMEKGDIKEVGNH
DELMALDGKYASLYNSQFV

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=196202 CCZ24_RS03640 WP_071659984.1 702320..704059(+) (rcrQ) [Streptococcus agalactiae strain B105]
ATGAACTTGACAATGCTTAAACGTTTATACACCTATATCAAACCCAATCGTCTTGGTTTCTTCACAGCACTTTTCCTTGT
TGCTGCTGGTACTGGACTTACCGTCCTAGCGCCAAGCTACACGGGGCAAATCACGACTCAGCTCTACAATGGCATTAGTC
AAGGCTCTTTTGATTGGAAAGCTATTTTCCAATTGAGTGTTATTGTTGCAGGTCTCTATCTAGTTGGGCAAAGTCTGGTT
TTCTTGGCTTCCTTCACCTTAGCCAAAGTTATCGCTAAGTCAGTCGAGCGTTTGAGAAATGAGGTTAGTAGTAAAATTCA
CCGTCTACCTATTAATTATTATGATACCCGTGGTAATGGTGAAATCCTCAGTGTCATCACCAATGATATTGACATCCTCA
ATAACTTCCTCAGCCAGAACTTGCAGGAAATTATTGTTCAGACTGTGACCATTGTGGGCATTTTCTCCATCATGCTCTCT
ATCAATGGTTGGTTAACCTTGGTTGCTGTCATCATGGTTCCTATCTCCCTCCTGACAGCAGCGAGTTCAGCTAGCTTTGG
ACAAAAGATGTATGAAAAGCAGCAGAACTTGATTGGGCAGGTCAATGGCTACATTGAAGAAATTTATAACGGTCATAATG
TCGTGCAGGCTTTTAACTACCAAGACCGTGCCAAGGCAAAATTCGATAGTCTTAATAAAGAATTGCAGAGCACCGCAGAA
AAGGCAGAAACTTATGCCAGCTATGTCATGCCACTGATTAAGATTGTCAATAATGCAGGCTATGTCATCAGTGCCGTCTG
GGGAAGTTTTATGGCACTACAAGGCACCATGACAGTTGGTAATGTCCAAGCCATGCTTCAATACACCCAGCAGTTCAATG
AGCCATTTAGCTCTATCGCTGGTATGGTCGGGGCTTATAGCTCAGCCATGGCAGGTAGTCAGCGTATCTTTGAACTGCTT
GACGAGACTGAAGAAGTAGCTGACCAAGCCACAAGCCAAGACCTGTCCAAACAAGCAGGACGTGTCGAATTCAAGCATGT
CAAGTTTGGCTACACACCTGATAATCTGCTGATGCAAGATGTTAATGTTACCGTTGAACCTGGTCAAAAAGTAGCCATTG
TGGGACCTACTGGGGCAGGTAAAACCACCCTCATCAACCTCCTCATGCGTTTCTATGAAATCAATGACGGTCAAATTTTA
GTGGACGGTGTAGACACACGTCAGATGAGTCGTGAACAGCTCCGTAGCCAGTTTGGCATGGTGCTCCAAGATACTTGGTT
CTTTGAAGGCTCTATCATGGAAAATCTCCAGTATGGTCGAGAGAATATCTCCCATGACCAAGCTATCTCTGCTGCCAAAA
TGGCATCAGCACACAGCTTTATCAAAACCCAGCCAGGCAGTTACGATATGGTTTTGGAAAATAACGGAGAGAACATCTCT
CAAGGTGAGCGTCAGCTTTTGACAATTGCCCGTGCCATTGCTGCCAATCCTAAAATGCTGATTTTGGACGAGGCGACATC
TAACGTTGATACCTATACTGAGCAGCTCATTCAAAAAGCCATGGCCAAACTCATGGAAGGGCGCACCAGCTTTGTCATCG
CCCACCGTTTGTCGACCATTAAGGATGCTCACGTCATTCTCTACATGGAAAAAGGTGATATCAAGGAGGTCGGCAACCAT
GATGAGCTCATGGCTCTAGATGGCAAATATGCTAGTCTCTATAATAGCCAGTTTGTCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.667

99.482

0.415