Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CCZ24_RS03635 Genome accession   NZ_CP021773
Coordinates   700594..702339 (+) Length   581 a.a.
NCBI ID   WP_071659983.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 695594..707339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS03600 (CCZ24_03545) - 696910..697208 (-) 299 Protein_675 DUF5960 family protein -
  CCZ24_RS03605 (CCZ24_03550) - 697195..697563 (-) 369 WP_000567222.1 hypothetical protein -
  CCZ24_RS03610 (CCZ24_03555) - 697576..697911 (-) 336 WP_071659982.1 imsC-like protein -
  CCZ24_RS03615 (CCZ24_03560) - 697908..698153 (-) 246 WP_001813542.1 hypothetical protein -
  CCZ24_RS03625 (CCZ24_03570) - 699118..699588 (+) 471 WP_000142891.1 MarR family winged helix-turn-helix transcriptional regulator -
  CCZ24_RS03630 (CCZ24_03575) - 699572..700597 (+) 1026 WP_000845068.1 aminoglycoside phosphotransferase family protein -
  CCZ24_RS03635 (CCZ24_03580) rcrP 700594..702339 (+) 1746 WP_071659983.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03640 (CCZ24_03585) rcrQ 702320..704059 (+) 1740 WP_071659984.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS03645 (CCZ24_03590) - 704171..704437 (-) 267 Protein_683 transposase -
  CCZ24_RS03650 (CCZ24_03595) - 704456..704950 (+) 495 WP_000482660.1 LPXTG cell wall anchor domain-containing protein -
  CCZ24_RS12030 - 705206..705469 (-) 264 Protein_685 DUF5960 family protein -
  CCZ24_RS11895 (CCZ24_03600) - 705825..706075 (-) 251 Protein_686 hypothetical protein -
  CCZ24_RS12035 (CCZ24_03605) - 706122..706921 (+) 800 Protein_687 IS30 family transposase -
  CCZ24_RS03665 (CCZ24_03610) - 707032..707250 (+) 219 WP_000278092.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 63152.62 Da        Isoelectric Point: 9.3533

>NTDB_id=196201 CCZ24_RS03635 WP_071659983.1 700594..702339(+) (rcrP) [Streptococcus agalactiae strain B105]
MNQIFSRVKFKKKYFVWLFTFLIIAIAGETALPTLMAEMIEQGVVNQATNSIWLLAGGMVLVVLMAFVGNMLVGKISSRI
ATLFARDVRKALFDKVQSFSGQELDKFGTASLITRTTSDVTNLQSFLSAGLQIGMLAPLMMAAGVVLVAVTGGETSSVLV
FTLPILLIAMTVVLVLATRYSKALRLTLDKINRIFLEILQGVRVIRAFNKQETEKARFGQTNSQYADISLKNNRLMGGMM
PFIQVIFGLTTIGVMAVGAEAVAKGKITVSALVANSQYVALILGAIVMAAFIISFFPTAFASMSRIGEVLGIEVKITDGD
DEQAMTEAQGTVTFKDVTFSYADAAEPVLKDISFTSKPGQVTAIIGATGSGKSSVLKLIPRLYDITFGEIKVNGRNVKDY
KLQELRDIIGYVPQKNVLFSGDIASNLNFGQEDGTEADWKRAADIASASEFIADKPGNYQSEIAQGGTNLSGGQRQRMAI
ARAMMKRPQVYLLDDSLSALDMKTDKQVRTNLRANLDQATMIMVAQRISSIMDAEQIILISEGKIAGKGTHKELLKNNDI
YRELAILQLGEEAVAYELDNA

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=196201 CCZ24_RS03635 WP_071659983.1 700594..702339(+) (rcrP) [Streptococcus agalactiae strain B105]
ATGAACCAAATATTTTCAAGGGTTAAATTCAAGAAAAAATACTTTGTTTGGCTATTTACTTTTCTCATTATTGCTATCGC
TGGTGAGACGGCCCTACCTACCCTTATGGCTGAGATGATTGAGCAGGGCGTTGTCAACCAAGCAACCAACAGTATTTGGC
TCTTAGCAGGGGGAATGGTACTGGTCGTGCTCATGGCCTTTGTGGGCAATATGCTAGTCGGAAAGATTTCCTCACGGATT
GCGACACTCTTTGCTCGTGATGTGCGCAAGGCACTCTTTGACAAGGTTCAGTCATTTTCTGGACAGGAGTTGGATAAGTT
TGGGACAGCCAGTCTCATTACGCGGACCACTTCAGATGTGACCAATCTTCAGTCATTCTTATCGGCAGGCTTGCAGATTG
GTATGCTGGCGCCACTTATGATGGCAGCAGGTGTAGTCCTAGTTGCTGTTACTGGTGGTGAGACCAGTAGTGTACTTGTT
TTCACTCTGCCTATCCTCTTGATTGCGATGACTGTGGTTTTGGTTTTAGCTACTCGCTATTCCAAAGCCCTGCGTTTGAC
CTTGGACAAGATTAACCGTATTTTCCTAGAAATATTACAAGGTGTCCGTGTTATCCGTGCCTTTAATAAACAGGAAACAG
AGAAAGCCCGTTTTGGTCAAACCAATAGCCAATATGCTGATATTTCTCTTAAAAACAACCGTCTCATGGGTGGGATGATG
CCTTTTATCCAAGTGATTTTTGGTCTGACTACGATTGGTGTCATGGCTGTCGGCGCTGAGGCTGTGGCTAAGGGGAAAAT
CACGGTTAGTGCCCTTGTCGCTAATAGTCAGTATGTTGCTCTCATCCTTGGTGCCATCGTCATGGCAGCCTTTATCATCA
GTTTCTTCCCGACGGCTTTTGCCAGTATGTCACGTATCGGTGAGGTTTTGGGGATCGAGGTCAAAATTACTGACGGTGAT
GATGAGCAAGCTATGACGGAAGCTCAGGGAACAGTGACCTTTAAGGATGTGACCTTCTCCTATGCTGACGCAGCAGAACC
AGTCCTAAAAGACATCAGTTTCACCTCAAAACCTGGTCAAGTGACCGCCATTATCGGTGCTACTGGGTCAGGAAAATCTT
CAGTCCTTAAGCTTATTCCACGTCTTTACGACATCACTTTTGGTGAAATCAAGGTCAACGGTCGTAATGTCAAAGATTAT
AAATTACAGGAACTTCGAGACATTATCGGCTATGTCCCTCAGAAAAACGTCCTCTTCTCAGGTGATATCGCAAGTAACCT
CAACTTTGGTCAGGAAGACGGAACAGAGGCGGACTGGAAACGTGCAGCAGACATTGCCTCAGCCTCAGAATTTATCGCAG
ATAAGCCAGGGAATTATCAATCAGAAATTGCCCAAGGTGGGACCAATCTATCAGGTGGACAACGCCAGCGTATGGCCATT
GCCCGTGCCATGATGAAACGTCCGCAGGTTTATCTCCTTGATGATAGTCTGTCAGCACTTGATATGAAGACGGATAAACA
AGTTCGTACCAATCTGCGTGCCAACCTTGACCAAGCCACCATGATTATGGTGGCGCAACGTATCAGTTCTATCATGGACG
CTGAGCAAATTATCCTCATTAGTGAAGGAAAAATTGCAGGTAAAGGCACCCATAAAGAATTACTGAAAAACAACGACATC
TATCGTGAACTAGCTATTTTACAACTGGGAGAGGAGGCGGTTGCCTATGAACTTGACAATGCTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-285)

ABC transporter (ABC_tran)

(349-496)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.987

100

0.373