Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   CDH81_RS10725 Genome accession   NZ_CP021772
Coordinates   2045882..2046070 (+) Length   62 a.a.
NCBI ID   WP_000886223.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B111     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2040882..2051070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH81_RS10695 (CDH81_10580) - 2040908..2041090 (+) 183 Protein_1980 hypothetical protein -
  CDH81_RS10700 (CDH81_10585) metK 2041144..2042181 (+) 1038 WP_000640709.1 methionine adenosyltransferase -
  CDH81_RS10705 (CDH81_10590) - 2042183..2042548 (+) 366 WP_001138027.1 HNH endonuclease signature motif containing protein -
  CDH81_RS10710 (CDH81_10595) - 2042866..2043321 (+) 456 WP_000999416.1 hypothetical protein -
  CDH81_RS10715 (CDH81_10600) - 2043293..2044549 (+) 1257 WP_000211738.1 site-specific DNA-methyltransferase -
  CDH81_RS10720 (CDH81_10605) - 2044546..2045817 (+) 1272 WP_001241132.1 DNA cytosine methyltransferase -
  CDH81_RS10725 (CDH81_10610) prx 2045882..2046070 (+) 189 WP_000886223.1 hypothetical protein Regulator
  CDH81_RS10730 (CDH81_10615) - 2046141..2046365 (+) 225 WP_000158644.1 hypothetical protein -
  CDH81_RS10735 (CDH81_10620) - 2046480..2046734 (+) 255 WP_000211844.1 hypothetical protein -
  CDH81_RS10740 (CDH81_10625) - 2046736..2046945 (+) 210 WP_000998225.1 DUF4314 domain-containing protein -
  CDH81_RS10745 (CDH81_10630) - 2046994..2047467 (+) 474 WP_001007669.1 phage terminase small subunit P27 family -
  CDH81_RS10750 (CDH81_10635) - 2047464..2049056 (+) 1593 WP_000220981.1 terminase TerL endonuclease subunit -
  CDH81_RS10755 (CDH81_10640) - 2049123..2049416 (+) 294 WP_000024184.1 hypothetical protein -
  CDH81_RS10760 (CDH81_10645) - 2049409..2049747 (+) 339 WP_000181405.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CDH81_RS10765 (CDH81_10650) - 2049831..2050070 (+) 240 WP_000024081.1 hypothetical protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7075.21 Da        Isoelectric Point: 4.0548

>NTDB_id=196171 CDH81_RS10725 WP_000886223.1 2045882..2046070(+) (prx) [Streptococcus agalactiae strain B111]
MLDLNDFMKEVKSGRISKDSIRVVRLNGVIIDYVLPQESVSENEVVEVMTLNDMVAEIFELC

Nucleotide


Download         Length: 189 bp        

>NTDB_id=196171 CDH81_RS10725 WP_000886223.1 2045882..2046070(+) (prx) [Streptococcus agalactiae strain B111]
ATGCTTGATTTGAATGATTTTATGAAAGAGGTAAAGAGTGGACGTATCTCTAAAGATAGCATCAGAGTTGTTCGTCTAAA
TGGTGTGATTATTGATTACGTTCTTCCTCAGGAATCGGTGAGTGAGAATGAGGTTGTTGAAGTAATGACTTTGAATGACA
TGGTAGCGGAGATTTTTGAACTCTGTTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

41.379

93.548

0.387


Multiple sequence alignment