Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CDH81_RS01185 Genome accession   NZ_CP021772
Coordinates   256702..257370 (+) Length   222 a.a.
NCBI ID   WP_000076873.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain B111     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 251702..262370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH81_RS01165 (CDH81_01165) - 252241..252729 (-) 489 WP_001140791.1 PASTA domain-containing protein -
  CDH81_RS01170 (CDH81_01170) - 252895..253857 (+) 963 WP_001253125.1 S41 family peptidase -
  CDH81_RS01175 (CDH81_01175) - 253883..254635 (+) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  CDH81_RS01180 (CDH81_01180) - 254637..256592 (+) 1956 WP_000499554.1 FtsX-like permease family protein -
  CDH81_RS01185 (CDH81_01185) braR 256702..257370 (+) 669 WP_000076873.1 response regulator transcription factor Regulator
  CDH81_RS01190 (CDH81_01190) - 257367..258305 (+) 939 WP_000620983.1 sensor histidine kinase -
  CDH81_RS01195 (CDH81_01195) xerS 258348..259418 (-) 1071 WP_000817930.1 tyrosine recombinase XerS Machinery gene
  CDH81_RS01200 (CDH81_01200) - 259762..261219 (+) 1458 Protein_233 peptide ABC transporter substrate-binding protein -
  CDH81_RS01205 (CDH81_01205) - 261252..262025 (-) 774 WP_000622398.1 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25419.51 Da        Isoelectric Point: 5.0692

>NTDB_id=196083 CDH81_RS01185 WP_000076873.1 256702..257370(+) (braR) [Streptococcus agalactiae strain B111]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSCQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=196083 CDH81_RS01185 WP_000076873.1 256702..257370(+) (braR) [Streptococcus agalactiae strain B111]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTTGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAGCTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(8-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464