Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BFP66_RS07775 Genome accession   NZ_CP017142
Coordinates   1572322..1573371 (-) Length   349 a.a.
NCBI ID   WP_063725335.1    Uniprot ID   -
Organism   Streptococcus suis strain GZ0565     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1567322..1578371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFP66_RS07755 (BFP66_07755) trpB 1567853..1569028 (-) 1176 WP_015647230.1 tryptophan synthase subunit beta -
  BFP66_RS07760 (BFP66_07760) - 1569848..1570375 (-) 528 WP_024396123.1 VanZ family protein -
  BFP66_RS07765 (BFP66_07765) rlmN 1570372..1571484 (-) 1113 WP_012028433.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  BFP66_RS07770 (BFP66_07770) - 1571493..1572134 (-) 642 WP_063725334.1 YutD family protein -
  BFP66_RS07775 (BFP66_07775) sepM 1572322..1573371 (-) 1050 WP_063725335.1 SepM family pheromone-processing serine protease Regulator
  BFP66_RS07780 (BFP66_07780) coaD 1573358..1573846 (-) 489 WP_024396122.1 pantetheine-phosphate adenylyltransferase -
  BFP66_RS07785 (BFP66_07785) rsmD 1573836..1574375 (-) 540 WP_014638485.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BFP66_RS07790 (BFP66_07790) - 1574675..1575397 (-) 723 WP_024396121.1 hypothetical protein -
  BFP66_RS07795 (BFP66_07795) - 1575454..1575840 (-) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  BFP66_RS07800 (BFP66_07800) - 1575840..1576058 (-) 219 WP_004194736.1 YqgQ family protein -
  BFP66_RS07805 (BFP66_07805) - 1576366..1576968 (-) 603 WP_024396120.1 response regulator transcription factor -
  BFP66_RS07810 (BFP66_07810) - 1576965..1578059 (-) 1095 WP_024396119.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37704.77 Da        Isoelectric Point: 4.5532

>NTDB_id=195966 BFP66_RS07775 WP_063725335.1 1572322..1573371(-) (sepM) [Streptococcus suis strain GZ0565]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIAQFYMETSQNMAKYQGLTLAGKEVTLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=195966 BFP66_RS07775 WP_063725335.1 1572322..1573371(-) (sepM) [Streptococcus suis strain GZ0565]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAAGAGTATTTTCGTATAGCACAGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTACCAAGGTTTGACCTTGGCAGGAAAAGAAGTCACTCTTGATTTCTTTGGTGTCT
ATGTACTTGCCTTGGCGGATGATTCGACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAACTTGGAAGTGATGTGACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAAATTATCAAATTGTCTAATGGCAAAAATGGGATAGGCATTACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACGGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATCTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAACCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACGAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

61.383

99.427

0.61


Multiple sequence alignment