Detailed information NTG0195917

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: LCW_RS10450
• Genome accession: NZ_CP017124
• Coordinates: 175866..176573 (-)
• Length: 235 a.a.
• NCBI ID: WP_081326584.1
• Uniprot ID: -
• Organism: Latilactobacillus curvatus strain WiKim38
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 170866..181573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCW_RS00875 (LCW_00875)	rpoC	172152..175793 (+)	3642	WP_004270200.1	DNA-directed RNA polymerase subunit beta'	-
LCW_RS10450	comC	175866..176573 (-)	708	WP_081326584.1	prepilin peptidase	Machinery gene
LCW_RS00885 (LCW_00885)	rpsL	176844..177257 (+)	414	WP_004270179.1	30S ribosomal protein S12	-
LCW_RS00890 (LCW_00890)	rpsG	177347..177817 (+)	471	WP_004270185.1	30S ribosomal protein S7	-
LCW_RS00895 (LCW_00895)	fusA	177909..179996 (+)	2088	WP_004270213.1	elongation factor G	-
LCW_RS10435	rsgA	180641..181114 (-)	474	WP_081326585.1	ribosome small subunit-dependent GTPase A	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26560.85 Da
• Isoelectric Point: 6.9137

>NTDB_id=195917 LCW_RS10450 WP_081326584.1 175866..176573(-) (comC) [Latilactobacillus curvatus strain WiKim38]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQTGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIVNT

Nucleotide

• Length: 708 bp

>NTDB_id=195917 LCW_RS10450 WP_081326584.1 175866..176573(-) (comC) [Latilactobacillus curvatus strain WiKim38]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGTGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGTGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGACTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489