Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BS16045_RS07790 Genome accession   NZ_CP017112
Coordinates   1468538..1469113 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS16045     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1463538..1474113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS16045_RS07760 (BS16045_01521) dapD 1463726..1464436 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BS16045_RS07765 (BS16045_01522) dapI 1464506..1465630 (+) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  BS16045_RS07770 (BS16045_01523) ykuS 1465692..1465937 (+) 246 WP_003232382.1 YkuS family protein -
  BS16045_RS07775 (BS16045_01524) mscT 1465974..1466777 (-) 804 WP_029317733.1 small-conductance mechanosensitive channel protein MscT -
  BS16045_RS07780 (BS16045_01525) ahpA 1467014..1467556 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BS16045_RS07785 (BS16045_01526) ykuV 1467626..1468072 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  BS16045_RS07790 (BS16045_01527) rok 1468538..1469113 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BS16045_RS07795 (BS16045_01528) cse15 1469154..1470119 (-) 966 WP_029317734.1 spore protein Cse15 -
  BS16045_RS07800 (BS16045_01529) mobA 1470256..1470855 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  BS16045_RS07805 (BS16045_01530) moeB 1470906..1471925 (+) 1020 WP_029317735.1 molybdopterin-synthase adenylyltransferase MoeB -
  BS16045_RS07810 (BS16045_01531) glp 1471943..1473235 (+) 1293 WP_069322564.1 gephyrin-like molybdotransferase Glp -
  BS16045_RS07815 (BS16045_01532) mobB 1473196..1473717 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=195690 BS16045_RS07790 WP_003232378.1 1468538..1469113(+) (rok) [Bacillus subtilis strain BS16045]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=195690 BS16045_RS07790 WP_003232378.1 1468538..1469113(+) (rok) [Bacillus subtilis strain BS16045]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment