Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BS16045_RS07685 Genome accession   NZ_CP017112
Coordinates   1452699..1453163 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain BS16045     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1447699..1458163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS16045_RS07665 (BS16045_01502) kinA 1448166..1449986 (+) 1821 WP_046380991.1 sporulation histidine kinase KinA -
  BS16045_RS07670 (BS16045_01503) dapX 1449996..1451177 (-) 1182 WP_014479654.1 aminotransferase A -
  BS16045_RS07675 (BS16045_01504) - 1451379..1451540 (-) 162 WP_003245246.1 hypothetical protein -
  BS16045_RS07680 (BS16045_01505) cheV 1451744..1452655 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  BS16045_RS07685 (BS16045_01506) kre 1452699..1453163 (-) 465 WP_003232406.1 YkyB family protein Regulator
  BS16045_RS07690 (BS16045_01507) ykuC 1453289..1454581 (-) 1293 WP_015252195.1 MFS transporter -
  BS16045_RS07695 (BS16045_01508) ltdD 1454657..1455151 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  BS16045_RS07700 (BS16045_01509) ppeE 1455208..1456068 (-) 861 WP_024573035.1 metallophosphoesterase -
  BS16045_RS07705 (BS16045_01510) fadH 1456211..1456975 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=195689 BS16045_RS07685 WP_003232406.1 1452699..1453163(-) (kre) [Bacillus subtilis strain BS16045]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=195689 BS16045_RS07685 WP_003232406.1 1452699..1453163(-) (kre) [Bacillus subtilis strain BS16045]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment