Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   BS16045_RS04645 Genome accession   NZ_CP017112
Coordinates   903773..904567 (+) Length   264 a.a.
NCBI ID   WP_069322466.1    Uniprot ID   -
Organism   Bacillus subtilis strain BS16045     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 898773..909567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS16045_RS04615 (BS16045_00904) sxzA 899612..900643 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  BS16045_RS04620 (BS16045_00905) yfhB 900758..901639 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  BS16045_RS04625 (BS16045_00906) yfhC 901727..902311 (+) 585 WP_032723010.1 nitroreductase family protein -
  BS16045_RS04630 (BS16045_00907) yfhD 902350..902541 (-) 192 WP_003233561.1 YfhD family protein -
  BS16045_RS04635 (BS16045_00908) yfhE 902608..902718 (-) 111 WP_003223230.1 YfhE family protein -
  BS16045_RS04640 (BS16045_00909) yfhF 902773..903684 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  BS16045_RS04645 (BS16045_00910) recX 903773..904567 (+) 795 WP_069322466.1 recombination regulator RecX Regulator
  BS16045_RS04650 (BS16045_00911) yfhH 904569..904883 (+) 315 WP_069322467.1 YfhH family protein -
  BS16045_RS04660 (BS16045_00913) yfhI 905026..906219 (+) 1194 WP_003243500.1 MFS transporter -
  BS16045_RS04665 (BS16045_00914) sspK 906251..906403 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BS16045_RS04670 (BS16045_00915) yfhJ 906528..906797 (+) 270 WP_015252516.1 YfhJ family protein -
  BS16045_RS04675 (BS16045_00916) yfhK 906942..907460 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  BS16045_RS04680 (BS16045_00917) spdL 907545..907877 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  BS16045_RS04685 (BS16045_00918) ephM 907864..908724 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 30989.21 Da        Isoelectric Point: 6.9997

>NTDB_id=195672 BS16045_RS04645 WP_069322466.1 903773..904567(+) (recX) [Bacillus subtilis strain BS16045]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIGDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=195672 BS16045_RS04645 WP_069322466.1 903773..904567(+) (recX) [Bacillus subtilis strain BS16045]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGGTGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment